National Heart, Lung, and Blood Institute

Epithelial Systems Biology Laboratory (ESBL)


Transcripts Decreased by Protein Kinase A Deletion in mpkCCD Cells

Compendium of transcripts downregulated by deletion of protein kinase A (PMID: 28973931) using RNA-seq in mpkCCD cells.

Database was created by Angela Mak and Mark Knepper in the Epithelial Systems Biology Laboratory (Mark Knepper, Chief) at the National Heart, Lung and Blood Institute as part of its Kidney Systems Biology Project.

To search, use browser's Find command (Ctrl-F)

Gene Symbol Protein Name Log2 Ratio (KO/Ctrl) UniProt Number
Aqp2 aquaporin-2 -6.41 P56402
Pde4b cAMP-specific 3',5'-cyclic phosphodiesterase 4B  -4.77 Q6IQY6
Gsdmc2 gasdermin-C2 -3.97 Q2KHK6
Prkaca cAMP-dependent protein kinase catalytic subunit alpha  -3.73 P05132
Zhx2 zinc fingers and homeoboxes protein 2 -3.70 Q8C0C0
Adh1 alcohol dehydrogenase 1 -3.10 P00329
Gsdmc4 gasdermin-C4 -2.25 Q3TR54
Tmprss4 transmembrane protease serine 4  -2.25 Q8VCA5
Cd55 complement decay-accelerating factor, GPI-anchored preproprotein -2.11 Q61475
Fcgbp IgGFc-binding protein  -1.98 E9Q0B5
Prom1 prominin-1 isoform s8  -1.98 O54990
Inmt indolethylamine N-methyltransferase -1.92 P40936
Ros1 proto-oncogene tyrosine-protein kinase ROS  -1.84 Q78DX7
Baiap2l2 brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 -1.82 Q80Y61
AU021092 UPF0764 protein C16orf89 homolog  -1.73 Q3UST5
Chst13 carbohydrate sulfotransferase 13  -1.69 Q8NET6
Ly6e lymphocyte antigen 6E  -1.63 Q64253
Aldh3b2 aldehyde dehydrogenase family 3 member B2 -1.62 E9Q3E1
Epas1 endothelial PAS domain-containing protein 1 -1.55 P97481
Cyfip2 cytoplasmic FMR1-interacting protein 2 -1.53 Q5SQX6
Aqp5 aquaporin-5 -1.51 Q9WTY4
Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase -1.49 Q10470
Sema4a semaphorin-4A  -1.45 Q62178
Clic3 chloride intracellular channel protein 3 -1.41 Q9D7P7
Fry protein furry homolog -1.39 E9Q8I9
Sh2d4b SH2 domain-containing protein 4B  -1.39 A6X942
Plpp3 phospholipid phosphatase 3 -1.38 Q99JY8
Mapre2 microtubule-associated protein RP/EB family member 2  -1.37 Q8R001
G6pc3 glucose-6-phosphatase 3 -1.37 Q6NSQ9
Upk1a uroplakin-1a -1.35 Q9D132
Eya2 eyes absent homolog 2 -1.35 O08575
Top1mt DNA topoisomerase I, mitochondrial  -1.35 Q8R4U6
Hid1 protein HID1  -1.35 Q8R1F6
Gsta4 glutathione S-transferase A4 -1.30 P24472
Tmem45b transmembrane protein 45B -1.29 Q8VCZ2
Ipcef1 interactor protein for cytohesin exchange factors 1  -1.26 Q5DU31
Abcc3 ATP-binding cassette sub-family C member 3  -1.26 B2RX12
Akr1b3 aldo-keto reductase family 1 member B1 -1.22 Q5U415
Phyhipl phytanoyl-CoA hydroxylase-interacting protein-like  -1.22 Q8BGT8
Rab15 ras-related protein Rab-15  -1.19 Q8K386
Muc4 mucin-4  -1.17 Q8JZM8
Timp3 metalloproteinase inhibitor 3  -1.15 P39876
Bcl2l14 apoptosis facilitator Bcl-2-like protein 14 -1.14 Q9CPT0
Tgm1 protein-glutamine gamma-glutamyltransferase K -1.14 Q9JLF6
Upk3b uroplakin-3b  -1.11 Q80YF6
Bcat1 branched-chain-amino-acid aminotransferase, cytosolic  -1.11 P24288
Dnm3 dynamin-3  -1.09 Q8BZ98
Slc4a11 solute carrier family 4 member 11 -1.08 A2AJN7
Mettl7a1 methyltransferase-like protein 7A -1.08 Q8C6B0
Gstt2 glutathione S-transferase theta-2 -1.08 Q61133
Tmem213 transmembrane protein 213 -1.08 Q08EA8
Dock5 dedicator of cytokinesis protein 5 -1.07 B2RY04
Crabp2 cellular retinoic acid-binding protein 2 -1.05 P22935
Eepd1 endonuclease/exonuclease/phosphatase family domain-containing protein 1 -1.04 Q3TGW2
Hs3st1 heparan sulfate glucosamine 3-O-sulfotransferase 1  -1.03 O35310
Gas1 growth arrest-specific protein 1 -1.03 Q01721
Clec2d C-type lectin domain family 2 member D -1.01 Q91V08
Kank4 KN motif and ankyrin repeat domain-containing protein 4 -1.01 Q6P9J5
Abcc4 ATP-binding cassette sub-family C member 4  -0.95 E9Q236
Napsa napsin-A  -0.95 O09043
Lrrc26 leucine-rich repeat-containing protein 26  -0.94 Q91W20
Trim2 tripartite motif-containing protein 2  -0.93 Q9ESN6
Npr3 atrial natriuretic peptide receptor 3 -0.92 P70180
Nadk2 NAD kinase 2, mitochondrial  -0.89 Q8C5H8
Tpd52l1 tumor protein D53  -0.88 O54818
Arhgdib rho GDP-dissociation inhibitor 2  -0.88 Q61599
Oxr1 oxidation resistance protein 1  -0.88 Q4KMM3
Lgals3 galectin-3 -0.88 P16110
Rai14 ankycorbin  -0.87 Q9EP71
Ccser1 serine-rich coiled-coil domain-containing protein 1 -0.87 Q8C0C4
Tcn2 transcobalamin-2  -0.86 O88968
Osgin1 oxidative stress-induced growth inhibitor 1 -0.86 Q8VC10
Ghr growth hormone receptor  -0.86 P16882
Tspan14 tetraspanin-14 -0.85 Q8QZY6
9130008F23Rik uncharacterized protein C6orf141 homolog -0.85 A0A6P5RBI2
Fgf1 fibroblast growth factor 1 -0.85 P61148
Fam65a protein FAM65A isoform X6 -0.85 Q68FE6
Gadd45a growth arrest and DNA damage-inducible protein GADD45 alpha -0.83 P48316
Slc6a9 sodium- and chloride-dependent glycine transporter 1  -0.83 P28571
Runx1 runt-related transcription factor 1  -0.83 Q03347
Muc20 mucin-20 isoform a  -0.80 Q8BUE7
Gstm2 glutathione S-transferase Mu 2 -0.79 P15626
Sat1 diamine acetyltransferase 1  -0.79 P48026
Arap1 arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1  -0.79 Q4LDD4
Klf5 Krueppel-like factor 5 -0.77 Q9Z0Z7
Slc46a1 proton-coupled folate transporter -0.75 Q6PEM8
Pabpc1 polyadenylate-binding protein 1 -0.75 P29341
Gstt3 glutathione S-transferase theta-3  -0.74 Q99L20
Bcar3 breast cancer anti-estrogen resistance protein 3 homolog  -0.74 Q9QZK2
Foxk1 forkhead box protein K1 -0.73 P42128
Sned1 sushi, nidogen and EGF-like domain-containing protein 1  -0.72 Q70E20
Slc25a37 mitoferrin-1 -0.71 Q920G8
Bid BH3-interacting domain death agonist -0.71 P70444
Laptm4b lysosomal-associated transmembrane protein 4B -0.71 Q91XQ6
Cldn8 claudin-8 -0.71 Q9Z260
Asns asparagine synthetase [glutamine-hydrolyzing] -0.70 Q61024
Scmh1 polycomb protein SCMH1  -0.70 Q8K214
Dap death-associated protein 1 -0.70 Q91XC8
Spry2 protein sprouty homolog 2 -0.70 Q9QXV8
Mgat4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A  -0.68 Q812G0
Tars threonine--tRNA ligase 1, cytoplasmic -0.68 Q9D0R2
Capg macrophage-capping protein -0.66 P24452
Dcaf11 DDB1- and CUL4-associated factor 11 -0.66 Q91VU6
Dhrs4 dehydrogenase/reductase SDR family member 4  -0.66 Q99LB2
Cbr2 carbonyl reductase [NADPH] 2 -0.65 P08074
Slc37a1 glucose-6-phosphate exchanger SLC37A1 -0.65 Q8R070
Pck2 phosphoenolpyruvate carboxykinase [GTP], mitochondrial -0.65 Q8BH04
H6pd GDH/6PGL endoplasmic bifunctional protein  -0.65 Q8R1C3
Vopp1 vesicular, overexpressed in cancer, prosurvival protein 1  -0.65 O89051
Itm2b integral membrane protein 2B  -0.63 Q8BH06
Il17re interleukin-17 receptor E  -0.63 Q9Z329
Itpr2 inositol 1,4,5-trisphosphate receptor type 2  -0.63 P35456
Plaur urokinase plasminogen activator surface receptor  -0.62 Q8R3R8
Gabarapl1 gamma-aminobutyric acid receptor-associated protein-like 1 -0.61 Q9DBB1
Dusp6 dual specificity protein phosphatase 6 -0.60 Q8C7B8
Zswim4 zinc finger SWIM domain-containing protein 4 -0.59 Q6J9G1
Styk1 tyrosine-protein kinase STYK1 -0.58 Q8K4L3
Svil supervillin  -0.58 Q8BJZ3
Tmbim1 protein lifeguard 3 -0.57 O88554
Rpph1 ribonuclease P RNA component H1 -0.56 Q9D823
Rpl37 60S ribosomal protein L37 -0.56 Q9CQH0
Pdzk1ip1 PDZK1-interacting protein 1  -0.55 Q8K0Q5
Arhgap18 rho GTPase-activating protein 18 -0.55 Q9EST8
Nfkbiz NF-kappa-B inhibitor zeta  -0.55 Q9QXS1
Plec plectin  -0.55 O35375
Nrp2 neuropilin-2   -0.54 Q8BYZ7
Elmo3 engulfment and cell motility protein 3 -0.53 Q91XA2
Golm1 Golgi membrane protein 1 -0.51 Q80TP3
Ubr5 E3 ubiquitin-protein ligase UBR5  -0.46 Q3URS9

To search, use browser's Find command (Cntrl F)

Gene Symbol Protein Name Log2 Ratio (KO/Ctrl) UniProt Number