Brief Description: Proximal convoluted tubules were isolated from the cortex of normal rats and from rats that were fed NH₄Cl for 1-7 days to induce metabolic acidosis. Apical membranes (1), mitochondria (2) and cytosol (3) were purified from the isolated tubules. The purified fractions were digested with trypsin and the resulting peptides were fractionated by 2-dimensional liquid chromatography and analyzed by mass spectrometry. The relative abundance of the identified proteins was determined by spectral counting.

References:

1. Proteomic Profiling of the Effect of Metabolic Acidosis on the Apical Membrane of the Proximal Convoluted Tubule, Scott J. Walmsley, Dana M. Freund and Norman P. Curthoys, Am. J. Physiol. Renal Physiol. 302, F1465-1477 (2012).
2. Response of the Mitochondrial Proteome of Rat Renal Proximal Convoluted Tubules to Chronic Metabolic Acidosis, Dana M. Freund, Jessica E. Prenni, and Norman P. Curthoys, Am J Physiol Renal Physiol. 304, F145-F155 (2013).
3. Proteomic profiling and pathway analysis of the response of rat renal proximal convoluted tubules to metabolic acidosis., Dana M. Freund, Jessica E. Prenni, and Norman P. Curthoys, Am J Physiol Renal Physiol. 305, F628-40 (2013).

Abbreviations:

• TMD - number of predicted transmembrane domains
• AM - apical membrane
• C - cytosolic
• M - mitochondria
• SpC - mean raw spectral counts

Protein Name	Gene Name	Accession #	Fraction	TMD	Control	1-D Acidotic		3-D Acidotic		7-D Acidotic
					SpC	SpC	P-value	SpC	P-value	SpC	P-value
[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial	Bckdk	Q00972	M		3.1 ± 1.1					3.3 ± 0.3	0.87
[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial	Pdk2	Q64536	M		9.4 ± 3					20.6 ± 3.9	0.081
10 kDa heat shock protein, mitochondrial	Hspe1	P26772	M		129.3 ± 24.3					154.1 ± 16.5	0.44
10 kDa heat shock protein, mitochondrial	Hspe1	P26772	C		0.3 ± 0.3	1.0 ± 1.0	0.52			0.3 ± 0.3	0.894
10-formyltetrahydrofolate dehydrogenase	Aldh1l1	P28037	AM	0	2.00 ± 0.6	1.00 ± 0.0	0.225	1.00 ± 0.0	0.225	1.33 ± 0.3	0.423
14-3-3 protein beta/alpha	Ywhab	P35213	M		13.7 ± 6.8					7 ± 4.8	0.47
14-3-3 protein epsilon	Ywhae	P62260	M		27.3 ± 10.9					14.5 ± 6.1	0.36
14-3-3 protein epsilon	Ywhae	P62260	C		11.0 ± 7.4	12.3 ± 10.3	0.857			3.3 ± 1.7	0.463
14-3-3 protein theta	Ywhaq	P68255	C		1.3 ± 1.3	5.3 ± 5.3	0.497			0.0 ± 0.0	0.685
14-3-3 protein zeta/delta	Ywhaz	P63102	M		31.8 ± 10.1					15.1 ± 4.6	0.2
14-3-3 protein zeta/delta	Ywhaz	P63102	AM	0	5.33 ± 0.3	2.33 ± 0.9	0.035	2.00 ± 0.6	0.063	1.00 ± 0.0	0.006
14-3-3 protein zeta/delta	Ywhaz	P63102	C		14.3 ± 6.7	16.3 ± 10.3	0.976			9.0 ± 8.0	0.768
2,4-dienoyl-CoA reductase, mitochondrial	Decr1	Q64591	M		66.8 ± 11.5					95.5 ± 4.5	0.081
26S protease regulatory subunit 4	Psmc1	P62193	C		0.7 ± 0.7	0.7 ± 0.3	0.778			1.0 ± 1.0	0.613
26S proteasome non-ATPase regulatory subunit 2	Psmd2	Q4FZT9	C		3.3 ± 1.8	3.3 ± 1.5	0.78			1.0 ± 0.6	0.23
28S ribosomal protein S31, mitochondrial	Mrps31	B0BN56	M		0.4 ± 0.4					1 ± 1	0.61
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase	Acmsd	Q8R5M5	M		6.7 ± 3.4					1.2 ± 0.3	0.18
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase	Acmsd	Q8R5M5	C		21.0 ± 11.2	12.0 ± 7.2	0.27			5.0 ± 2.5	0.134
2-hydroxyacyl-CoA lyase 1	Hacl1	Q8CHM7	M		1.9 ± 1.9					4.2 ± 0.8	0.32
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial	Coq5	Q4G064	M		0.8 ± 0.8					0.6 ± 0.3	0.87
2-oxoglutarate dehydrogenase complex E2	Dlst	Q01205	AM	0	1.00 ± 0.0	5.33 ± 1.8	0.133	1.33 ± 0.3	0.423	9.33 ± 2.7	0.093
2-oxoglutarate dehydrogenase, mitochondrial	Ogdh	Q5XI78	M		235.6 ± 22.9					236.5 ± 10.6	0.97
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment)	Bckdha	P11960	M		36.9 ± 6.8					37.3 ± 8.1	0.97
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial	Bckdhb	P35738	M		23.1 ± 5.9					18.9 ± 3.7	0.57
39S ribosomal protein L10, mitochondrial	Mrpl10	P0C2C4	M		1.5 ± 1.5					0.9 ± 0.6	0.74
39S ribosomal protein L17, mitochondrial	Mrpl17	Q6PDW6	M		1.1 ± 0.7					0.4 ± 0.4	0.32
3-hydroxyanthranilate 3,4-dioxygenase	Haao	P46953	C		2.3 ± 1.2	1.3 ± 1.3	0.388			0.3 ± 0.3	0.214
3-hydroxybutyrate dehydrogenase type 2	Bdh2	D4A1J4	C		7.3 ± 3.0	4.3 ± 1.9	0.329			2.7 ± 1.8	0.182
3-hydroxyisobutyrate dehydrogenase, mitochondrial	Hibadh	P29266	M		117.5 ± 19.5					150.9 ± 2.8	0.16
3-hydroxyisobutyrate dehydrogenase, mitochondrial	Hibadh	P29266	C		1.3 ± 1.3	5.0 ± 2.1	0.215			0.3 ± 0.3	0.565
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial	Hibch	Q5XIE6	M		1.1 ± 1.1					2.8 ± 1.6	0.44
3-mercaptopyruvate sulfurtransferase	Mpst	P97532	M		72.7 ± 5.6					79.1 ± 13.2	0.68
3-mercaptopyruvate sulfurtransferase	Mpst	P97532	C		8.0 ± 4.9	6.0 ± 2.9	0.688			1.3 ± 1.3	0.205
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial	Oxsm	G3V6R7	M		3.3 ± 1.7					3.3 ± 0.8	0.98
40S ribosomal protein S15	Rps15	P62845	M		2 ± 1.1					0.4 ± 0.4	0.19
40S ribosomal protein S19	Rps19	P17074	M		2.8 ± 1.4					0.4 ± 0.4	0.16
40S ribosomal protein S24	Rps24	D4A6H5	AM	0	1.00 ± 0.0	1.33 ± 0.3	0.423	1.00 ± 0.0	1	1.33 ± 0.3	0.423
40S ribosomal protein S24	Rps24	D4A6H5	C		21.0 ± 8.7	8.0 ± 4.0	0.206			16.7 ± 8.4	0.724
40S ribosomal protein S27-like	Rps27l	P24051	C		1.3 ± 1.3	0.0 ± 0.0	0.267			0.0 ± 0.0	0.267
40S ribosomal protein S3	Rps3	P62909	C		5.0 ± 2.1	8.0 ± 3.2	0.622			3.7 ± 1.9	0.731
40S ribosomal protein S3a	Rps3a	P49242	C		6.3 ± 3.2	10.3 ± 2.8	0.754			10.7 ± 4.3	0.458
40S ribosomal protein S4, X isoform	Rps4x	P62703	AM	0	1.00 ± 0.0	1.33 ± 0.3	0.423	1.33 ± 0.3	0.423	1.00 ± 0.0	1
40S ribosomal protein S4, X isoform	Rps4x	P62703	C		9.0 ± 3.5	3.7 ± 0.3	0.235			7.7 ± 4.7	0.814
40S ribosomal protein S8	Rps8	P62243	C		3.7 ± 1.9	1.7 ± 0.9	0.488			5.3 ± 3.0	0.601
40S ribosomal protein S9	Rps9	P29314	C		1.7 ± 0.3	0.0 ± 0.0	0.419			3.3 ± 2.4	0.503
40S ribosomal protein SA	Rpsa	P38983	C		6.0 ± 3.2	3.7 ± 0.3	0.387			5.0 ± 1.5	0.932
4-aminobutyrate aminotransferase, mitochondrial	Abat	P50554	M		142.9 ± 18.8					150.7 ± 13.8	0.75
4F2 cell-surface antigen heavy chain	Slc3a2	Q794F9	AM	1	45.00 ± 4.4	22.33 ± 6.	0.007	23.67 ± 2.	0.036	34.00 ± 8.	0.214
4F2 cell-surface antigen heavy chain	Slc3a2	Q794F9	M	1	105.6 ± 13					50.6 ± 6.9	0.02
4-hydroxyphenylpyruvate dioxygenase	Hpd	P32755	M		10.5 ± 4.4					7.9 ± 2.3	0.62
4-hydroxyphenylpyruvate dioxygenase	Hpd	P32755	AM	0	1.67 ± 0.3	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184
4-hydroxyphenylpyruvate dioxygenase (Fragment)	Hpd	F1LNW9	C		38.3 ± 9.8	53.7 ± 4.2	0.4			16.3 ± 4.4	0.067
4-trimethylaminobutyraldehyde dehydrogenase	Aldh9a1	Q9JLJ3	C		29.7 ± 10.0	46.0 ± 21.4	0.666			47.0 ± 11.9	0.465
5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)	Mthfs	Q5M9F6	M		2.3 ± 1.8					2.7 ± 1.8	0.89
5'-nucleotidase	Nt5e	P21588	M	1	2.3 ± 1.8					1.2 ± 0.3	0.56
5-oxoprolinase	Oplah	P97608	C		7.3 ± 5.4	6.3 ± 2.8	0.78			2.0 ± 0.6	0.383
60 kDa heat shock protein, mitochondrial	Hspd1	P63039	M		834.1 ± 196					1039.4 ± 103.5	0.41
60 kDa heat shock protein, mitochondrial	Hspd2	P63039	AM	0	1.00 ± 0.0	7.00 ± 1.7	0.074	10.33 ± 4.	0.198	1.33 ± 0.3	0.423
60 kDa heat shock protein, mitochondrial	Hspd1	P63039	C		4.7 ± 1.9	19.3 ± 6.4	0.061			5.0 ± 1.5	0.828
60S acidic ribosomal protein P0	Rplp0	P19945	M		5.9 ± 2.7					5.1 ± 2.1	0.82
60S acidic ribosomal protein P0	Rplp0	P19945	C		17.3 ± 2.3	7.0 ± 2.1	0.192			15.7 ± 8.8	0.895
60S acidic ribosomal protein P1	Rplp1	P19944	AM	0	4.00 ± 1.0	6.33 ± 1.3	0.192	3.33 ± 1.5	0.728	7.00 ± 2.9	0.511
60S acidic ribosomal protein P1	Rplp1	P19944	C		7.7 ± 0.3	4.0 ± 1.5	0.148			4.7 ± 2.3	0.361
60S acidic ribosomal protein P2	Rplp2	P02401	AM	0	1.00 ± 0.0	1.00 ± 0.0	1	1.33 ± 0.3	0.423	1.67 ± 0.7	0.423
60S acidic ribosomal protein P2	Rplp2	P02401	M		2.7 ± 0.7					0.7 ± 0.4	0.057
60S ribosomal protein L12	Rpl12	P23358	M		11.4 ± 4.4					2.2 ± 1.4	0.12
60S ribosomal protein L13	LOC100361259	D4A075	C		0.7 ± 0.7	3.0 ± 1.2	0.278			2.0 ± 1.2	0.404
60S ribosomal protein L15	Rpl15	P61314	M		7 ± 2.3					4 ± 2	0.37
60S ribosomal protein L6	Rpl6	P21533	AM	0	1.00 ± 0.0	2.67 ± 0.9	0.199	1.00 ± 0.0	1	2.00 ± 1.0	0.423
60S ribosomal protein L6	Rpl6	F1LQS3	C		11.3 ± 3.8	5.0 ± 2.1	0.429			10.3 ± 7.4	0.878
60S ribosomal protein L7	Rpl7	P05426	M		3.4 ± 1.1					1.2 ± 0.8	0.16
6-phosphogluconate dehydrogenase	Pgd	P85968	AM	0	3.33 ± 0.9	1.00 ± 0.0	0.118	1.00 ± 0.0	0.118	1.00 ± 0.0	0.118
6-phosphogluconate dehydrogenase, decarboxylating	Pgd	P85968	C		10.0 ± 3.5	10.7 ± 1.3	0.826			9.3 ± 6.4	0.859
6-phosphogluconolactonase	Pgls	P85971	C		7.0 ± 0.6	1.7 ± 0.3	0.025			5.0 ± 1.7	0.372
78 kDa glucose-regulated protein	Hspa5	P06761	M		98.4 ± 14.8					113.1 ± 16.2	0.54
Ab1-331	LOC502176	Q7TP86	AM	0	1.33 ± 0.3	3.00 ± 1.5	0.444	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423
Abhydrolase domain-containing protein 14B	Abhd14b	Q6DGG1	C		1.7 ± 0.9	2.7 ± 0.9	0.876			3.7 ± 1.9	0.326
Acad9 protein	Acad9	B1WC61	M		9.2 ± 4.2					7.3 ± 4.1	0.76
Acetyl-CoA acetyltransferase, mitochondrial	Acat1	P17764	M		181.8 ± 17					201.4 ± 22.2	0.52
Acetyl-CoA acetyltransferase, mitochondrial	Acat1	P17764	C		13.3 ± 6.6	21.3 ± 8.2	0.43			5.7 ± 3.3	0.532
Acetyl-Coenzyme A acyltransferase 2 (Mitochondrial 3-oxoacyl-Coenzyme A thiolase), isoform CRA_f	Acaa2	G3V9U2	M		225.8 ± 47.4					290.6 ± 40	0.35
Acid ceramidase	Asah1	Q6P7S1	M		0.4 ± 0.4					1.2 ± 0.9	0.41
acid phosphatase 2, lysosomal	Acp2	D4A7Q8	AM	1	2.33 ± 0.3	1.00 ± 0.0	0.057	1.00 ± 0.0	0.057	3.33 ± 1.2	0.423
Acidic leucine-rich nuclear phosphoprotein 32 family member A	Anp32a	P49911	C		2.0 ± 1.5	8.3 ± 4.1	0.113			2.0 ± 1.5	0.874
Aconitate hydratase, mitochondrial	Aco2	Q9ER34	M		455.8 ± 27.7					508.1 ± 23.5	0.22
Aconitate hydratase, mitochondrial	Aco2	Q9ER34	C		4.7 ± 4.2	11.7 ± 6.2	0.417			1.7 ± 0.9	0.649
Actin related protein 2/3 complex, subunit 4 (Predicted), isoform CRA_a	Arpc4	B2RZ72	C		1.0 ± 1.0	3.7 ± 2.0	0.366			3.7 ± 1.9	0.259
Actin, alpha cardiac muscle 1	Actc1	P68035	M		276.1 ± 47.5					230.8 ± 8.5	0.4
Actin, alpha cardiac muscle 1	Actc1	P68035	C		100.7 ± 21.8	88.3 ± 6.7	0.155			67.0 ± 6.6	0.095
Actin, cytoplasmic 1	Actb	P60711	AM	0	58.33 ± 9.9	72.00 ± 4.	0.39	73.33 ± 5.	0.384	67.33 ± 11	0.156
Actin, cytoplasmic 2	Actg1	P63259	M		311.3 ± 30					286.9 ± 17.3	0.52
Actin, cytoplasmic 2	Actg1	P63259	C		303.0 ± 41.8	300.7 ± 41.3	0.197			243.3 ± 22.9	0.333
Actin-related protein 3	Actr3	Q4V7C7	M		4 ± 2.5					0.9 ± 0.6	0.29
Actin-related protein 3	Actr3	Q4V7C7	AM	0	3.67 ± 0.9	2.00 ± 1.0	0.464	1.00 ± 0.0	0.094	2.00 ± 1.0	0.464
Actin-related protein 3	Actr3	Q4V7C7	C		6.0 ± 3.0	2.7 ± 1.7	0.297			4.0 ± 2.1	0.737
Acyl carrier protein	LOC683884	D3ZF13	M		30.1 ± 2.6					29.2 ± 12	0.95
Acyl-CoA dehydrogenase family member 11	Acad11	B3DMA2	M		1.5 ± 1.5					0.6 ± 0.6	0.59
Acyl-CoA synthetase family member 2, mitochondrial	Acsf2	Q499N5	M		63.2 ± 14					44.5 ± 9.6	0.33
Acyl-CoA thioesterase 9	Acot9	Q5U2X8	M		3.2 ± 2.2					0.7 ± 0.4	0.3
Acyl-CoA-binding protein	Dbi	P11030	M		23.6 ± 7.5					13.2 ± 1.3	0.24
Acyl-CoA-binding protein	Dbi	P11030	C		9.0 ± 6.0	8.3 ± 2.3	0.887			5.0 ± 1.0	0.625
Acyl-Coenzyme A dehydrogenase, very long chain	Acadvl	Q5M9H2	M		90.1 ± 19.6					118.4 ± 8.2	0.25
Acyl-coenzyme A synthetase ACSM2	Acsm2	O70490	AM	0	1.00 ± 0.0	5.67 ± 0.3	0.005	2.67 ± 1.7	0.423	1.00 ± 0.0	1
Acyl-coenzyme A synthetase ACSM2, mitochondrial	Acsm2	O70490	M		233.3 ± 25.4					248.2 ± 13.6	0.63
Acyl-coenzyme A synthetase ACSM2, mitochondrial	Acsm2	O70490	C		2.0 ± 2.0	4.0 ± 2.1	0.492			0.7 ± 0.3	0.579
Acyl-coenzyme A synthetase ACSM3, mitochondrial	Acsm3	Q6SKG1	M		27.4 ± 9.4					41.5 ± 9.7	0.35
Acyl-coenzyme A synthetase ACSM5, mitochondrial	Acsm5	Q6AYT9	M		0.8 ± 0.8					5.5 ± 3.9	0.3
Acyl-coenzyme A thioesterase 1	Acot1	O88267	C		15.3 ± 4.2	9.7 ± 3.7	0.084			6.0 ± 1.2	0.047
Acyl-coenzyme A thioesterase 2, mitochondrial	Acot2	O55171	M		86.8 ± 13.5					70.7 ± 8.1	0.36
Acyl-coenzyme A thioesterase 8	Acot8	Q8VHK0	C		0.7 ± 0.7	1.0 ± 1.0	0.996			2.0 ± 1.5	0.401
Acyl-protein thioesterase 1	Lypla1	P70470	M		15.6 ± 6					16.7 ± 0.3	0.86
Acylpyruvase FAHD1, mitochondrial	Fahd1	Q6AYQ8	M		30.8 ± 9.8					56.6 ± 8.3	0.11
Adaptor protein complex AP-1, beta 1 subunit, isoform CRA_a	Ap1b1	G3V9N8	M		17.8 ± 4.6					14.1 ± 4.4	0.59
Adaptor protein complex AP-1, beta 1 subunit, isoform CRA_a	Ap1b1	G3V9N8	C		7.0 ± 3.5	6.3 ± 2.4	0.713			4.3 ± 3.0	0.623
Adaptor protein complex AP-2 subunit mu	Ap2m1	P84092	AM	0	1.33 ± 0.3	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423	2.00 ± 0.6	0.423
Adenine phosphoribosyltransferase	Aprt	P36972	AM	0	2.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	1.00 ± 0.0	1
Adenine phosphoribosyltransferase	Aprt	P36972	C		9.0 ± 4.6	6.3 ± 2.6	0.525			6.7 ± 3.0	0.937
Adenosylhomocysteinase	Ahcy	P10760	M		3.1 ± 2					2.2 ± 0.9	0.68
Adenosylhomocysteinase	Ahcyl2	D3ZI25	AM	0	2.00 ± 1.0	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423	1.67 ± 0.7	0.84
Adenosylhomocysteinase	Ahcy	P10760	C		6.7 ± 4.4	3.0 ± 3.0	0.342			1.7 ± 0.9	0.311
Adenosylhomocysteinase	Ahcyl2	D3ZWL6	C		0.7 ± 0.3	1.0 ± 1.0	0.691			0.3 ± 0.3	0.833
Adenylate kinase 3	Ak3	Q6P2A5	M		14.2 ± 3.9					16.9 ± 2.8	0.6
Adenylate kinase isoenzyme 1	Ak1	P39069	C		2.7 ± 2.2	2.7 ± 1.8	0.727			1.3 ± 0.9	0.541
Adenylate kinase isoenzyme 4, mitochondrial	Ak4	Q9WUS0	M		140.7 ± 13					181.8 ± 16.9	0.13
Adenylyl cyclase-associated protein 1	Cap1	Q08163	M		4.2 ± 3.6					0.7 ± 0.4	0.38
Adenylyl cyclase-associated protein 1	Cap2	Q08163	AM	0	2.67 ± 1.2	1.00 ± 0.0	0.3	1.00 ± 0.0	0.3	1.00 ± 0.0	0.3
Adenylyl cyclase-associated protein 1	Cap1	Q08163	C		4.0 ± 2.1	4.0 ± 1.0	0.661			0.3 ± 0.3	0.096
Adipocyte plasma membrane-associated protein	Apmap	Q7TP48	M		17.6 ± 6.8					13.9 ± 5.7	0.69
ADP/ATP translocase 1	Slc25a4	Q05962	M	4	99.3 ± 32.9					106.9 ± 10.6	0.84
ADP/ATP translocase 1	Slc25a5	Q05962	AM	4	1.00 ± 0.0	2.00 ± 0.6	0.225	1.67 ± 0.7	0.423	2.33 ± 0.3	0.057
ADP/ATP translocase 2	Slc25a5	Q09073	M	2	265.7 ± 54					286.7 ± 12.7	0.72
ADP/ATP translocase 2	Slc25a6	Q09073	AM	2	1.00 ± 0.0	8.00 ± 1.5	0.045	5.33 ± 1.5	0.096	4.67 ± 1.2	0.093
ADP-ribosylation factor 1	Arf1	P84079	C		11.7 ± 6.6	13.0 ± 6.4	0.822			6.0 ± 5.0	0.503
ADP-ribosylation factor 3	Arf3	P61206	M		5.1 ± 2.7					3 ± 0.6	0.47
ADP-ribosylation factor 4	Arf4	P61751	C		2.7 ± 0.3	2.3 ± 1.2	0.401			0.3 ± 0.3	0.054
ADP-ribosylation factor-like protein 8B	Arl8b	Q66HA6	M		5.8 ± 2.5					3.3 ± 0.8	0.37
Aflatoxin B1 aldehyde reductase 2	Akr7a2	Q8CG45	AM	0	2.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	1.00 ± 0.0	1
Aflatoxin B1 aldehyde reductase 3	Akr7a3	P38918	AM	0	8.67 ± 0.9	1.00 ± 0.0	0.013	1.00 ± 0.0	0.013	5.67 ± 0.9	0.189
Aflatoxin B1 aldehyde reductase member 2	Akr7a2	Q8CG45	M		19.3 ± 3					19.2 ± 3.7	0.98
Aflatoxin B1 aldehyde reductase member 2	Akr7a2	Q8CG45	C		35.3 ± 17.6	25.7 ± 5.0	0.406			23.3 ± 5.2	0.568
Aflatoxin B1 aldehyde reductase member 3	Akr7a3	P38918	M		3.9 ± 0.9					5.9 ± 1.7	0.33
Aflatoxin B1 aldehyde reductase member 3	Akr7a3	P38918	C		117.0 ± 22.6	98.3 ± 36.1	0.193			107.7 ± 13.0	0.792
Agmatinase, mitochondrial	Agmat	Q0D2L3	M		16.3 ± 2.2					21.5 ± 2.9	0.22
A-kinase anchor protein 2	Akap2	Q5U301	M		11.2 ± 7.4					15.8 ± 3.4	0.6
A-kinase anchor protein 2	Akap2	Q5U301	C		2.0 ± 1.5	0.7 ± 0.7	0.384			0.0 ± 0.0	0.214
Alanine--glyoxylate aminotransferase 2, mitochondrial	Agxt2	Q64565	M		426.8 ± 51.9					486.5 ± 29.9	0.38
Alanine--glyoxylate aminotransferase 2, mitochondrial	Agxt2	Q64565	C		5.0 ± 3.5	9.7 ± 5.4	0.362			1.3 ± 0.3	0.49
Alanyl (Membrane) aminopeptidase	Anpep	G3V7W7	M	1	146.6 ± 28.8					63.5 ± 31.8	0.12
Alanyl-tRNA synthetase, cytoplasmic	Aars	P50475	C		2.0 ± 1.0	1.0 ± 1.0	0.299			0.0 ± 0.0	0.11
Alcohol dehydrogenase [NADP+]	Akr1a1	P51635	M		103 ± 27.7					64.5 ± 6.1	0.25
Alcohol dehydrogenase [NADP+]	Akr1a2	P51635	AM	0	48.00 ± 8.6	1.00 ± 0.0	0.032	1.00 ± 0.0	0.032	3.00 ± 1.5	0.047
Alcohol dehydrogenase [NADP+]	Akr1a1	P51635	C		179.7 ± 74.7	132.3 ± 24.5	0.356			115.7 ± 42.1	0.504
Alcohol dehydrogenase 1	Adh1	P06757	C		5.7 ± 3.5	8.0 ± 2.0	0.57			4.3 ± 3.0	0.899
Aldehyde dehydrogenase family 6, subfamily A1, isoform CRA_b	Aldh6a1	G3V7J0	M	1	314.8 ± 67.5					320.7 ± 16.9	0.94
Aldehyde dehydrogenase family 6, subfamily A1, isoform CRA_b	Aldh6a1	G3V7J0	C		26.3 ± 14.7	66.0 ± 15.1	0.14			21.3 ± 18.4	0.928
Aldehyde dehydrogenase family 9, subfamily A1	Aldh9a1	G3V6J0	M		45.1 ± 6.7					36.7 ± 2.6	0.3
Aldehyde dehydrogenase, mitochondrial	Aldh2	P11884	M		206.4 ± 22.5					214.2 ± 9.1	0.76
Aldehyde dehydrogenase, mitochondrial	Aldh2	P11884	C		11.0 ± 7.1	15.0 ± 7.2	0.679			3.7 ± 2.7	0.379
Aldo-keto reductase family 1, member B10 (Aldose reductase)	Akr1b10	Q6AY99	M		8.6 ± 5.6					22 ± 6.7	0.2
Aldo-keto reductase family 1, member C1 (Dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	Akr1c1	Q3MHS3	M		5.9 ± 2.1					7.2 ± 3.7	0.76
Aldo-keto reductase family 1, member C1 (Dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	Akr1c1	Q3MHS3	C		6.7 ± 1.3	19.7 ± 7.3	0.114			10.0 ± 3.1	0.469
Aldo-keto reductase family 1, member C12-like 1	Akr1c12l1	A2VD16	C		1.7 ± 1.2	3.3 ± 0.3	0.513			2.3 ± 1.5	0.687
Aldose 1-epimerase	Galm	Q66HG4	C		20.3 ± 10.6	21.7 ± 8.0	0.851			22.0 ± 10.0	0.779
Alkaline phosphatase, tissue-nonspecific isozyme	Alpl	P08289	M		23.7 ± 8.6					21.1 ± 4.3	0.79
Alkaline phosphatase, tissue-nonspecific isozyme	Alpl	P08289	AM	0	8.67 ± 0.9	9.33 ± 0.7	0.691	7.67 ± 2.9	0.816	11.33 ± 2.	0.372
All-trans-13,14-dihydroretinol saturase, isoform CRA_b	Retsat	G3V7V6	M	1	0.8 ± 0.4					7.5 ± 2.3	0.043
Alpha II spectrin	Spna2	C9EH87	AM	0	3.33 ± 0.9	11.33 ± 3.	0.186	13.00 ± 3.	0.066	13.00 ± 5.	0.275
Alpha-2-HS-glycoprotein	Ahsg	P24090	M		17 ± 6.9					21 ± 2.6	0.61
Alpha-2-macroglobulin receptor-associated protein	Lrpap1	Q99068	M		25.5 ± 5.7					36.6 ± 0.4	0.12
Alpha-2u globulin PGCL2	LOC298116	Q8K1Q6	M		592.3 ± 156.2					829.7 ± 133.8	0.31
Alpha-actinin-4	Actn4	Q9QXQ0	M		81.4 ± 40.2					44.6 ± 14.5	0.44
Alpha-actinin-4	Actn4	Q9QXQ0	AM	0	24.00 ± 5.3	28.00 ± 3.	0.609	25.00 ± 1.	0.828	23.00 ± 8.	0.893
Alpha-actinin-4	Actn4	Q9QXQ0	C		57.7 ± 11.7	58.7 ± 12.3	0.78			39.3 ± 20.7	0.521
Alpha-aminoadipic semialdehyde dehydrogenase	Aldh7a1	Q64057	M		166.5 ± 17.1					155.2 ± 11.7	0.62
Alpha-aminoadipic semialdehyde dehydrogenase	Aldh7a1	Q64057	C		35.0 ± 2.0	52.0 ± 7.2	0.128			24.3 ± 2.4	0.167
Alpha-aminoadipic semialdehyde synthase, mitochondrial	Aass	A2VCW9	M		56.3 ± 16.2					116.3 ± 34.1	0.19
Alpha-centractin	Actr1a	P85515	C		6.3 ± 4.9	6.3 ± 2.8	0.878			5.0 ± 4.0	0.887
Alpha-crystallin B chain	Cryab	P23928	M		1.5 ± 1.5					0 ± 0	0.37
Alpha-enolase	Eno1	P04764	M		107 ± 35.8					56.2 ± 12.5	0.25
Alpha-enolase	Eno1	P04764	C		562.7 ± 184.8	671.3 ± 151.2	0.794			466.7 ± 62.1	0.891
Alpha-methylacyl-CoA racemase	Amacr	G3V8F9	M		11.1 ± 5.6					5.7 ± 1.1	0.4
Alpha-N-acetylgalactosaminidase	Naga	Q66H12	M		0.4 ± 0.4					4.4 ± 3	0.26
Alpha-soluble NSF attachment protein	Napa	P54921	AM	0	5.33 ± 0.7	1.33 ± 0.3	0.057	2.67 ± 0.7	0.057	8.00 ± 1.5	0.347
Alpha-soluble NSF attachment protein	Napa	P54921	C		1.3 ± 1.3	0.0 ± 0.0	0.267			0.0 ± 0.0	0.267
Aminoacylase-1A	Acy1a	Q6AYS7	M		18.4 ± 8.8					5.4 ± 1.4	0.22
Aminoacylase-1A	Acy1a	Q6AYS7	AM	0	7.67 ± 3.0	1.00 ± 0.0	0.153	1.00 ± 0.0	0.153	1.33 ± 0.3	0.194
Aminoacylase-1A	Acy1a	Q6AYS7	C		36.3 ± 18.9	32.3 ± 10.2	0.659			21.0 ± 3.1	0.441
Aminopeptidase N	Anpep	P15684	M	1	145.1 ± 27.9					90.7 ± 1.1	0.12
Aminopeptidase N	Anpep	P15684	AM	1	96.33 ± 5.3	40.67 ± 4.	0.01	51.00 ± 6.	0.018	87.00 ± 7.	0.33
Amnionless (Predicted)	Amn	D3ZFK9	M	1	0.9 ± 0.9					2.7 ± 1.6	0.35
Anamorsin	Ciapin1	Q5XID1	M		2.3 ± 2.3					0.7 ± 0.7	0.52
Angiotensinogen	Agt	P01015	M		5.8 ± 0.9					6.6 ± 2.1	0.76
Anionic trypsin-1	Prss1	P00762	M		77.6 ± 9.7					62.2 ± 0.7	0.19
Anionic trypsin-1	Prss1	P00762	AM	0	1.33 ± 0.3	6.00 ± 2.3	0.215	9.00 ± 1.0	0.024	9.33 ± 2.0	0.062
Annexin A1	Anxa1	P07150	C		0.0 ± 0.0	1.3 ± 1.3	0.293			0.3 ± 0.3	0.691
Annexin A11	Anxa11	Q5XI77	C		2.3 ± 1.9	0.3 ± 0.3	0.419			2.0 ± 2.0	0.966
Annexin A4	Anxa4	P55260	C		9.7 ± 6.5	4.7 ± 1.7	0.435			1.7 ± 0.9	0.252
Annexin A5	Anxa5	P14668	C		2.7 ± 2.7	2.7 ± 2.7	0.756			1.0 ± 0.6	0.581
Annexin A6	Anxa6	P48037	C		0.0 ± 0.0	1.3 ± 1.3	0.377			1.0 ± 1.0	0.471
AP-1 complex subunit beta-1	Ap1b1	D3ZS80	AM	0	1.33 ± 0.3	3.33 ± 1.9	0.438	3.33 ± 2.3	0.423	1.00 ± 0.0	0.423
AP-1 complex subunit beta-1	Ap1b1	P52303	AM	0	1.67 ± 0.3	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184
AP-1 complex subunit mu-1	Ap1m1	Q32Q06	C		0.7 ± 0.7	1.0 ± 0.0	0.854			2.3 ± 0.9	0.094
AP-2 complex subunit alpha-2	Ap2a2	P18484	M		20 ± 8					12.3 ± 6.2	0.48
AP-2 complex subunit alpha-2	Ap2a2	P18484	C		0.7 ± 0.7	2.3 ± 1.5	0.587			3.3 ± 1.8	0.26
AP-2 complex subunit mu	Ap2m1	P84092	M		5.3 ± 0.9					4.8 ± 1.4	0.76
Apoa1bp protein	Apoa1bp	B0BNM1	M		5.2 ± 3					7.1 ± 4	0.72
Apoa1bp protein	Apoa1bp	B0BN81	C		2.3 ± 0.9	1.7 ± 0.9	0.405			0.0 ± 0.0	0.086
Apolipoprotein A-I	Apoa1	P04639	M		5.5 ± 1.7					2.1 ± 1.4	0.19
Apolipoprotein A-IV	Apoa4	P02651	M		46.4 ± 10.1					83.6 ± 7.6	0.041
Apolipoprotein A-IV	Apoa4	P02651	AM	0	1.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	1.67 ± 0.3	0.184
Apolipoprotein E	Apoe	P02650	M		37 ± 13.4					48.1 ± 12.2	0.57
Apolipoprotein H	Apoh	Q5I0M1	M		8.8 ± 5.4					23.2 ± 2.2	0.066
Apoptosis-inducing factor 1, mitochondrial	Aifm1	Q9JM53	M		56.2 ± 12.8					59.3 ± 4.4	0.83
Apoptosis-inducing factor 1, mitochondrial	Aifm1	Q9JM53	AM	0	1.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	1.33 ± 0.3	0.423
Aquaporin-1	Aqp1	P29975	M	6	65.6 ± 7.6					46.4 ± 9.9	0.2
Aquaporin-1	Aqp1	P29975	AM	6	9.67 ± 0.3	7.67 ± 2.8	0.51	10.33 ± 0.	0.184	14.67 ± 0.	0.049
Argininosuccinate lyase	Asl	P20673	M		23.7 ± 6.9					9.6 ± 3.1	0.13
Argininosuccinate lyase	Asl	P20673	AM	0	5.00 ± 0.6	2.00 ± 0.6	0.096	1.33 ± 0.3	0.032	1.33 ± 0.3	0.053
Argininosuccinate lyase	Asl	P20673	C		18.0 ± 7.6	9.7 ± 1.9	0.193			10.0 ± 1.7	0.284
Argininosuccinate synthase	Ass1	P09034	M		125.9 ± 31.7					47.4 ± 6.7	0.072
Argininosuccinate synthase	Ass1	P09034	AM	0	31.67 ± 4.9	1.67 ± 0.3	0.023	3.00 ± 1.5	0.022	4.33 ± 3.3	0.031
Argininosuccinate synthase	Ass1	P09034	C		155.0 ± 36.8	181.0 ± 32.3	0.939			147.7 ± 15.6	0.901
Arginyl-tRNA synthetase, cytoplasmic	Rars	P40329	C		1.3 ± 1.3	2.7 ± 1.8	0.558			1.3 ± 0.7	0.999
Arl2bp Isoform 1	LOC689285	D3ZY88	AM	0	1.00 ± 0.0	2.00 ± 0.6	0.225	1.33 ± 0.3	0.423	1.00 ± 0.0	1
Armadillo repeat-containing X-linked protein 1	Armcx1	Q5U310	M	1	1.3 ± 1.3					0.4 ± 0.4	0.5
Aromatic-L-amino-acid decarboxylase	Ddc	P14173	C		4.3 ± 0.9	8.0 ± 0.6	0.437			4.3 ± 3.0	0.919
ARP1 actin-related protein 1 homolog B (Yeast)	Actr1b	B2RYJ7	M		1.9 ± 1					2.8 ± 1.1	0.57
Aspartate aminotransferase, cytoplasmic	Got1	P13221	M		4 ± 2.5					0.7 ± 0.4	0.25
Aspartate aminotransferase, cytoplasmic	Got1	P13221	C		1.0 ± 0.6	1.7 ± 1.7	0.869			1.7 ± 1.7	0.571
Aspartate aminotransferase, mitochondrial	Got2	P00507	M		160.3 ± 14.6					182.8 ± 21.2	0.43
Aspartate aminotransferase, mitochondrial	Got2	P00507	C		1.0 ± 1.0	2.0 ± 0.6	0.316			0.0 ± 0.0	0.267
Aspartoacylase	Aspa	Q9R1T5	C		1.7 ± 1.7	2.0 ± 0.0	0.728			2.0 ± 1.2	0.573
Aspartoacylase-2	Acy3	Q5M876	M		1.3 ± 1.3					1.8 ± 0.9	0.74
Aspartoacylase-2	Acy3	Q5M876	C		3.7 ± 0.3	2.7 ± 1.3	0.645			7.7 ± 3.8	0.262
Aspartyl aminopeptidase	Dnpep	Q4V8H5	M		12.2 ± 4.4					6.3 ± 1.5	0.26
Aspartyl aminopeptidase	Dnpep	Q4V8H5	C		0.3 ± 0.3	2.3 ± 2.3	0.39			0.7 ± 0.7	0.727
ATP synthase gamma chain	LOC100360100	Q6QI09	AM	0	1.00 ± 0.0	2.67 ± 0.9	0.199	1.33 ± 0.3	0.423	1.00 ± 0.0	1
ATP synthase gamma chain	LOC100360100	Q6QI09	M		103.2 ± 5.2					93.6 ± 5.8	0.28
ATP synthase subunit alpha, mitochondrial	Atp5a1	P15999	AM	0	12.33 ± 2.3	99.00 ± 12	0.014	91.67 ± 5.	0.009	58.67 ± 8.	0.018
ATP synthase subunit alpha, mitochondrial	Atp5a1	P15999	M		928.2 ± 109.1					797.2 ± 74.2	0.38
ATP synthase subunit b, mitochondrial	Atp5f1	P19511	M		139.5 ± 19.9					121.2 ± 4.2	0.42
ATP synthase subunit b, mitochondrial	Atp5f1	P19511	AM	0	1.00 ± 0.0	4.00 ± 0.6	0.035	3.33 ± 0.9	0.118	1.67 ± 0.7	0.423
ATP synthase subunit beta, mitochondrial	Atp5b	P10719	M		2271.5 ± 189.6					2056.3 ± 48.6	0.33
ATP synthase subunit beta, mitochondrial	Atp5b	P10719	AM	0	16.00 ± 4.9	126.67 ± 5	0	111.67 ± 0	0.003	51.00 ± 8.	0.012
ATP synthase subunit beta, mitochondrial	Atp5b	P10719	C		1.3 ± 0.3	1.3 ± 0.9	0.316			0.0 ± 0.0	0.024
ATP synthase subunit d, mitochondrial	Atp5h	P31399	M		228.5 ± 20.3					197.4 ± 15.9	0.29
ATP synthase subunit d, mitochondrial	Atp5h	P31399	AM	0	1.00 ± 0.0	21.67 ± 1.	0.007	24.33 ± 0.	0.001	10.67 ± 2.	0.077
ATP synthase subunit delta, mitochondrial	Atp5d	P35434	AM	0	1.00 ± 0.0	3.00 ± 1.0	0.184	2.33 ± 0.9	0.27	1.33 ± 0.3	0.423
ATP synthase subunit e, mitochondrial	Atp5i	P29419	M		26.9 ± 2.6					41.7 ± 11.5	0.28
ATP synthase subunit e, mitochondrial	Atp5i	P29419	AM	0	1.00 ± 0.0	10.00 ± 3.	0.125	8.33 ± 0.9	0.014	4.33 ± 1.2	0.109
ATP synthase subunit O, mitochondrial	Atp5o	Q06647	M		138.4 ± 22.8					157 ± 11	0.5
ATP synthase subunit O, mitochondrial	Atp5o	Q06647	AM	0	1.00 ± 0.0	21.67 ± 0.	0	14.67 ± 1.	0.018	9.33 ± 5.3	0.259
ATP synthase, H+ mitochondrial F0, subunit G	Atp5l	Q6PDU7	AM	0	1.00 ± 0.0	18.67 ± 0.	0	19.00 ± 1.	0.004	10.33 ± 0.	0.001
ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit, isoform CRA_b	Atp5d	G3V7Y3	M		20.3 ± 2.6					13.2 ± 2.1	0.094
ATP synthase-coupling factor 6, mitochondrial	Atp5j	P21571	M		115.7 ± 4.4					97 ± 3.4	0.027
ATP synthase-coupling factor 6, mitochondrial	Atp5j	P21571	AM	0	1.00 ± 0.0	1.67 ± 0.3	0.184	1.33 ± 0.3	0.423	1.00 ± 0.0	1
ATPase family AAA domain-containing protein 1	Atad1	Q505J9	M		0.4 ± 0.4					1.9 ± 0.6	0.09
ATPase family AAA domain-containing protein 3	Atad3	Q3KRE0	M		2.2 ± 1.7					3.6 ± 1.9	0.61
ATPase inhibitor, mitochondrial	Atpif1	Q03344	M		7.8 ± 3.3					7.8 ± 0.7	1
ATPase, H transporting, lysosomal V1 subunit G1	Atp6v1g1	B2GUV5	M		12.5 ± 4.4					6.3 ± 1.1	0.24
ATPase, H transporting, lysosomal V1 subunit G1	Atp6v1g1	B2GUV5	AM	0	2.33 ± 0.3	2.33 ± 0.3	1	2.00 ± 0.0	0.423	1.67 ± 0.3	0.184
ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1	Atp6v0d1	Q5M7T6	M		22.4 ± 5.8					18.7 ± 6.7	0.7
ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1	Atp6v0d1	Q5M7T6	AM	0	3.67 ± 0.3	1.00 ± 0.0	0.015	1.67 ± 0.3	0.074	7.33 ± 0.9	0.032
ATPase, H+ transporting, V1 subunit D, isoform CRA_c	Atp6v1d	Q6P503	M		8.9 ± 2.9					6.3 ± 1.5	0.46
ATPase, H+ transporting, V1 subunit E isoform 1, isoform CRA_a	Atp6v1e1	G3V7L8	M		92.5 ± 34.2					103.6 ± 11.2	0.77
ATPase, H+ transporting, V1 subunit E isoform 1, isoform CRA_a	Atp6v1e1	G3V7L8	C		3.0 ± 1.2	5.7 ± 1.8	0.217			0.3 ± 0.3	0.061
ATPase, H+, V1 subunit D, isoform CRA_c	Atp6v1d	Q6P503	AM	0	5.00 ± 1.2	1.00 ± 0.0	0.074	2.00 ± 0.0	0.122	4.33 ± 2.0	0.83
ATP-binding cassette sub-family B member 7, mitochondrial	Abcb7	Q704E8	M	5	7.4 ± 3.8					4.8 ± 2	0.57
ATP-binding cassette sub-family B member 8, mitochondrial	Abcb8	Q5RKI8	M	4	1.1 ± 1.1					0.4 ± 0.4	0.53
ATP-binding cassette sub-family D member 3	Abcd3	P16970	M	3	29.3 ± 6.4					52.5 ± 4.1	0.037
ATP-binding cassette sub-family G 2	Abcg2	Q80W57	AM	6	1.33 ± 0.3	1.67 ± 0.7	0.742	1.33 ± 0.3	1	4.33 ± 1.2	0.189
ATP-binding cassette sub-family G member 2	Abcg2	Q80W57	M	6	13.3 ± 3.6					9.9 ± 2.5	0.47
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial	Clpx	Q5U2U0	M		2.3 ± 0.6					2.7 ± 0.6	0.6
ATP-dependent RNA helicase DDX1	Ddx1	Q641Y8	C		0.0 ± 0.0	1.0 ± 1.0	0.298			0.7 ± 0.3	0.408
ATP-dependent RNA helicase DDX3X	Ddx3x	D4ADE8	AM	0	1.00 ± 0.0	1.33 ± 0.3	0.423	1.33 ± 0.3	0.423	1.00 ± 0.0	1
Basigin	Bsg	P26453	AM	1	10.67 ± 0.3	7.33 ± 1.9	0.184	4.33 ± 1.8	0.049	10.33 ± 3.	0.936
Beta-2-microglobulin	B2m	P07151	M	1	4.3 ± 1.2					7.2 ± 2.8	0.39
Beta-galactosidase	Glb1	D3ZUM4	C		6.7 ± 2.4	7.0 ± 1.5	0.848			3.7 ± 1.8	0.384
Beta-hexosaminidase subunit alpha	Hexa	Q641X3	M	1	3.9 ± 2.2					0.6 ± 0.3	0.2
Beta-hexosaminidase subunit alpha	Hexa	Q641X3	C		3.3 ± 2.0	1.7 ± 0.9	0.342			3.0 ± 1.5	0.801
Betaine--homocysteine S-methyltransferase 1	Bhmt	O09171	C		3.3 ± 1.3	9.0 ± 1.0	0.087			5.0 ± 1.7	0.407
Beta-lactamase-like protein 2	Lactb2	Q561R9	M		12.3 ± 4.2					8 ± 0.9	0.37
Bifunc. ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase	Dak	Q4KLZ6	AM	0	5.33 ± 1.5	3.00 ± 1.2	0.423	2.33 ± 0.9	0.035	2.00 ± 0.6	0.199
Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing)	Dak	Q4KLZ6	M		17.6 ± 7.9					4.3 ± 3	0.19
Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing)	Dak	Q4KLZ6	C		58.7 ± 16.0	57.3 ± 16.8	0.729			59.0 ± 28.5	0.88
Bifunctional purine biosynthesis protein PURH	Atic	O35567	C		5.7 ± 4.7	2.0 ± 1.5	0.345			1.3 ± 0.9	0.334
Biliverdin reductase A	Blvra	P46844	C		2.3 ± 1.5	6.7 ± 1.2	0.515			11.3 ± 5.5	0.101
Biphenyl hydrolase-like (Serine hydrolase)	Bphl	Q3B8N9	M		43 ± 7.9					47.3 ± 1.3	0.62
Brain acid soluble protein 1	Basp1	Q05175	AM	0	6.67 ± 0.9	5.00 ± 0.6	0.3	7.00 ± 0.6	0.742	2.67 ± 0.7	0.02
Brain protein 44	Brp44	P38718	AM	0	1.00 ± 0.0	7.67 ± 1.3	0.038	3.67 ± 1.8	0.27	1.00 ± 0.0	1
Brain protein 44-like protein	Brp44l	P63031	M		48.4 ± 3.3					42.9 ± 6.7	0.5
Branched-chain-amino-acid aminotransferase, mitochondrial	Bcat2	O35854	M		14.2 ± 6.5					8.7 ± 2.5	0.48
C-1-tetrahydrofolate synthase, cytoplasmic	Mthfd1	P27653	AM	0	3.33 ± 1.2	1.00 ± 0.0	0.192	1.00 ± 0.0	0.192	3.33 ± 0.7	1
Cadherin 16	Cdh16	Q66H67	AM	1	9.67 ± 0.3	11.00 ± 0.	0.27	11.67 ± 0.	0.184	14.67 ± 0.	0.013
Cadherin-related family 5	Cdhr5	Q9JIK1	AM	1	20.33 ± 2.4	16.00 ± 1.	0.281	14.67 ± 1.	0.185	10.00 ± 2.	0.115
CaiB/baiF CoA-transferase family protein C7orf10 homolog	NA	Q68FU4	M		5.2 ± 2.9					2.1 ± 1.7	0.41
Calbindin	Calb1	P07171	M		16.2 ± 8.4					0.9 ± 0.1	0.14
Calbindin	Calb1	P07171	AM	0	1.33 ± 0.3	2.00 ± 0.6	0.184	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423
Calbindin	Calb1	P07171	C		24.7 ± 16.3	3.7 ± 2.3	0.108			2.7 ± 1.5	0.111
Calm1	NA	D4ADE9	AM	0	2.00 ± 1.0	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423
Calmodulin	Calm1	P62161	M		33.6 ± 7.8					30.8 ± 4.1	0.76
Calnexin	Canx	P35565	M	1	35.1 ± 3.7					14.9 ± 1.6	0.007
Calpain-2 catalytic subunit	Capn2	Q07009	C		0.7 ± 0.3	1.3 ± 1.3	0.686			0.0 ± 0.0	0.489
Calreticulin	Calr	P18418	M		40.2 ± 4.5					38.9 ± 5.4	0.86
Canopy 2 homolog (Zebrafish)	Cnpy2	A0JN30	M		1.2 ± 0.1					1 ± 1	0.82
Carbonic anhydrase 2	Ca2	P27139	M		18.7 ± 8.3					11.2 ± 3.5	0.45
Carbonic anhydrase 2	Ca2	P27139	C		24.0 ± 8.5	21.7 ± 8.1	0.635			10.0 ± 6.0	0.259
Carbonic anhydrase 5B, mitochondrial	Ca5b	Q66HG6	M		0 ± 0					4.7 ± 1.9	0.068
Carbonyl reductase family member 4	Cbr4	Q7TS56	M		1.5 ± 0.8					6.9 ± 2.5	0.11
Carboxymethylenebutenolidase homolog	Cmbl	Q7TP52	C		4.3 ± 2.6	0.0 ± 0.0	0.055			0.0 ± 0.0	0.055
Carnitine O-acetyltransferase	Crat	Q704S8	M	1	10.8 ± 3					12.1 ± 3.9	0.81
Carnitine O-palmitoyltransferase 1, liver isoform	Cpt1a	P32198	M		16 ± 9					9.3 ± 1.9	0.5
Carnitine O-palmitoyltransferase 2, mitochondrial	Cpt2	P18886	M		23.1 ± 1.8					20.2 ± 2.8	0.42
Catalase	Cat	P04762	M		55.2 ± 12					123.1 ± 8.3	0.01
Catalase	Cat	P04762	AM	0	3.33 ± 1.2	1.00 ± 0.0	0.192	1.00 ± 0.0	0.192	1.00 ± 0.0	0.192
Catalase	Cat	P04762	C		129.7 ± 20.2	195.0 ± 31.5	0.081			163.3 ± 20.3	0.037
Catechol-O-methyltransferase domain containing 1 (Predicted), isoform CRA_a	Comtd1	D3ZM21	M	1	6 ± 3.1					4.1 ± 2.1	0.64
Catenin (Cadherin associated protein), alpha 1	Ctnna1	Q5U302	M		37.2 ± 5.1					26 ± 2.3	0.11
catenin delta-1	Ctnnd1	D3ZZ55	AM	0	1.33 ± 0.3	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423	1.67 ± 0.7	0.423
Cathepsin B	Ctsb	P00787	M		17.4 ± 3.9					10.9 ± 3.2	0.26
Cathepsin B	Ctsb	P00787	AM	0	10.33 ± 3.2	1.00 ± 0.0	0.099	1.00 ± 0.0	0.099	1.00 ± 0.0	0.099
Cathepsin B	Ctsb	P00787	C		76.0 ± 27.3	61.7 ± 26.1	0.649			48.7 ± 5.9	0.532
Cathepsin D	Ctsd	P24268	M		3.1 ± 2.5					6.8 ± 4.3	0.5
Cathepsin L1	Ctsl1	P07154	M		13.9 ± 5.6					9 ± 2.6	0.46
Cationic trypsin-3	Try3	P08426	M		1.6 ± 0.8					0.4 ± 0.4	0.21
CDGSH iron-sulfur domain-containing protein 1	Cisd1	B0K020	M	1	148.9 ± 9.3					142.2 ± 5.6	0.57
CDGSH iron-sulfur domain-containing protein 1	Cisd1	B0K020	AM	1	1.00 ± 0.0	1.67 ± 0.3	0.184	2.00 ± 0.6	0.225	1.00 ± 0.0	1
Cell division control protein 42 homolog	Cdc42	Q8CFN2	M		3 ± 2.5					2.5 ± 0.9	0.84
Cell division control protein 42 homolog	Cdc42	Q8CFN2	C		5.0 ± 2.5	0.3 ± 0.3	0.139			2.3 ± 1.9	0.433
Chaperonin subunit 8 (Theta) (Predicted), isoform CRA_a	Cct8	D4ACB8	C		2.3 ± 0.9	2.0 ± 1.2	0.854			4.3 ± 3.3	0.492
Chloride intracellular channel 4, isoform CRA_b	Clic4	G3V8C4	M		48.9 ± 11.1					40.2 ± 10.1	0.59
Chloride intracellular channel 4, isoform CRA_b	Clic4	G3V8C4	C		2.0 ± 1.0	4.0 ± 2.5	0.68			1.0 ± 0.6	0.564
Chloride intracellular channel protein 1	Clic1	Q6MG61	AM	0	3.33 ± 1.9	1.00 ± 0.0	0.336	1.00 ± 0.0	0.336	1.00 ± 0.0	0.336
Chloride intracellular channel protein 1	Clic1	Q6MG61	M		6 ± 3.6					4 ± 2	0.65
Chloride intracellular channel protein 1	Clic1	Q6MG61	C		8.7 ± 3.0	7.7 ± 4.7	0.598			16.3 ± 3.3	0.07
Chloride intracellular channel protein 4	Clic4	Q9Z0W7	AM	0	7.67 ± 6.2	1.00 ± 0.0	0.393	1.00 ± 0.0	0.393	1.00 ± 0.0	0.393
Choline dehydrogenase	Chdh	Q6UPE0	M		67.4 ± 13.6					90.1 ± 15	0.32
Citrate lyase subunit beta-like protein, mitochondrial	Clybl	Q5I0K3	M		21.3 ± 4					10 ± 2.8	0.079
Citrate synthase	Cs	G3V936	M		99.7 ± 8.8					82.6 ± 11.1	0.29
Clathrin coat assembly protein AP180	Snap91	D3ZWG0	AM	0	1.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	2.33 ± 0.7	0.184
Clathrin heavy chain 1	Cltc	P11442	AM	0	14.33 ± 0.9	33.67 ± 3.	0.045	26.33 ± 3.	0.045	12.33 ± 2.	0.627
Clathrin heavy chain 1	Cltc	P11442	M		94.7 ± 20.1					62.3 ± 5.9	0.2
Coactosin-like protein	Cotl1	B0BNA5	AM	0	3.67 ± 0.7	1.00 ± 0.0	0.057	1.00 ± 0.0	0.057	1.00 ± 0.0	0.057
Coactosin-like protein	Cotl1	B0BNA5	C		64.7 ± 9.7	78.3 ± 13.2	0.945			32.7 ± 17.0	0.191
Coatomer subunit beta	Copb1	P23514	C		1.3 ± 0.7	0.7 ± 0.7	0.346			0.3 ± 0.3	0.219
Coatomer subunit beta'	Copb2	O35142	C		0.7 ± 0.7	0.7 ± 0.7	0.868			0.7 ± 0.7	0.837
Coatomer subunit delta	Arcn1	Q66H80	C		1.3 ± 0.9	2.3 ± 1.3	0.726			1.7 ± 1.2	0.905
Coatomer subunit gamma	Copg	Q66H80	C		2.7 ± 1.8	0.3 ± 0.3	0.455			3.0 ± 3.0	0.877
Coenzyme A synthase	Coasy	Q5XIA5	M		10 ± 2.2					6.6 ± 0.6	0.21
Coenzyme Q6 homolog (Yeast)	Coq6	Q68FU7	M		5.3 ± 1.9					4.2 ± 0.8	0.6
Cofilin-1	Cfl1	P45592	M		27.4 ± 7.8					15.9 ± 3.7	0.25
Cofilin-1	Cfl1	P45592	AM	0	2.33 ± 0.3	1.00 ± 0.0	0.057	1.00 ± 0.0	0.057	1.00 ± 0.0	0.057
Cofilin-1	Cfl1	P45592	C		54.7 ± 6.9	51.3 ± 6.9	0.466			34.0 ± 11.9	0.285
Coiled-coil domain-containing protein 51	Ccdc51	Q5PPN7	M	1	0 ± 0					2.1 ± 1.1	0.12
Coiled-coil-helix-coiled-coil-helix domain containing 3 (Predicted), isoform CRA_a	Chchd3	D3ZUX5	M		6.7 ± 3.1					11.3 ± 0.7	0.21
Collagen alpha-1(I) chain	Col1a1	P02454	M		1.2 ± 0.8					2.7 ± 0.5	0.16
Collectrin	Tmem27	Q9ESG3	M	1	65.2 ± 5.1					69.2 ± 14.7	0.81
Collectrin	Tmem27	Q9ESG3	AM	1	15.00 ± 1.7	25.67 ± 1.	0.04	27.67 ± 2.	0.032	23.67 ± 0.	0.08
Complement component 1 Q subcomponent-binding protein, mitochondrial	C1qbp	O35796	M		76.3 ± 14.5					59 ± 2.6	0.3
Coronin, actin-binding protein, 1B, isoform CRA_a	Coro1b	G3V940	C		0.0 ± 0.0	1.7 ± 0.9	0.074			0.3 ± 0.3	0.589
Corticosteroid 11-beta-dehydrogenase isozyme 2	Hsd11b2	P50233	M		4 ± 2.2					1.5 ± 0.8	0.33
Creatine kinase U-type, mitochondrial	Ckmt1	P25809	M		5.6 ± 3.5					6.3 ± 1	0.86
Cubilin	Cubn	O70244	M		71.1 ± 16.3					48.7 ± 5.2	0.26
Cubilin	Cubn	O70244	C		0.3 ± 0.3	0.7 ± 0.7	0.638			0.0 ± 0.0	0.581
Cullin-associated NEDD8-dissociated protein 1	Cand1	P97536	C		15.7 ± 5.9	12.3 ± 2.9	0.536			14.0 ± 6.7	0.863
Cystathionine gamma-lyase	Cth	P18757	M		2.4 ± 1.3					3.9 ± 0.9	0.37
Cystathionine gamma-lyase	Cth	P18757	C		3.3 ± 1.7	2.0 ± 0.0	0.612			6.3 ± 2.4	0.148
Cysteine conjugate-beta lyase 1, isoform CRA_a	Ccbl1	G3V827	C		9.7 ± 5.2	14.0 ± 5.0	0.422			1.0 ± 0.6	0.092
Cytochrome b5	Cyb5a	P00173	M	1	37.6 ± 5.9					64.7 ± 2.9	0.014
Cytochrome b-c1 complex subunit 1, mitochondrial	Uqcrc1	Q68FY0	M		306.9 ± 44					255 ± 9.7	0.31
Cytochrome b-c1 complex subunit 1, mitochondrial	Uqcrc1	Q68FY0	AM	0	1.00 ± 0.0	9.00 ± 1.5	0.035	8.33 ± 2.3	0.088	10.00 ± 4.	0.175
Cytochrome b-c1 complex subunit 2, mitochondrial	Uqcrc2	P32551	M		182.5 ± 7					196.9 ± 11.6	0.35
Cytochrome b-c1 complex subunit 2, mitochondrial	Uqcrc2	P32551	AM	0	1.00 ± 0.0	11.67 ± 2.	0.034	12.33 ± 2.	0.06	3.00 ± 1.5	0.321
Cytochrome b-c1 complex subunit 6, mitochondrial	Uqcrh	Q5M9I5	M		24 ± 2.5					16.8 ± 4.4	0.22
Cytochrome b-c1 complex subunit 8	Uqcrq	Q7TQ16	M	1	42.6 ± 12.5					34.8 ± 4.5	0.59
Cytochrome b-c1 complex subunit Rieske, mitochondrial	Uqcrfs1	P20788	M		30 ± 6.4					21.4 ± 2.9	0.28
Cytochrome c oxidase 4 isoform 1, mitochondrial	Cox4i1	P10888	AM	1	1.00 ± 0.0	12.00 ± 2.	0.032	11.00 ± 1.	0.013	5.33 ± 3.0	0.281
Cytochrome c oxidase subunit 2	COII	Q8SEZ5	AM	2	1.67 ± 0.7	28.33 ± 3.	0.011	27.00 ± 1.	0.005	20.33 ± 2.	0.009
Cytochrome c oxidase subunit 2	COII	Q8SEZ5	M	2	72.5 ± 16.1					90.7 ± 8.5	0.37
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial	Cox4i1	P10888	M	1	78.6 ± 7.1					71.1 ± 6.8	0.49
Cytochrome c oxidase subunit 5A, mitochondrial	Cox5a	P11240	M		179.3 ± 11.4					154.7 ± 4.8	0.12
Cytochrome c oxidase subunit 5A, mitochondrial	Cox5a	P11240	AM	0	1.00 ± 0.0	10.67 ± 0.	0.001	12.33 ± 0.	0.001	11.67 ± 1.	0.029
Cytochrome c oxidase subunit 5B	Cox5b	P12075	AM	0	1.00 ± 0.0	2.67 ± 0.7	0.13	2.67 ± 0.7	0.13	1.33 ± 0.3	0.423
Cytochrome c oxidase subunit 5B, mitochondrial	Cox5b	P12075	M		30.1 ± 5.1					33.7 ± 3.1	0.58
Cytochrome c oxidase subunit 6A1, mitochondrial	Cox6a1	P10818	M		5.1 ± 1.3					3.3 ± 1	0.31
Cytochrome c oxidase subunit 6C-2	Cox6c2	P11951	M	1	58.9 ± 6.1					62.2 ± 8.6	0.77
Cytochrome c oxidase subunit 6C-2	Cox6c2	P11951	AM	1	1.00 ± 0.0	2.00 ± 1.0	0.423	1.00 ± 0.0	1	2.00 ± 1.0	0.423
Cytochrome c oxidase subunit 7A2, mitochondrial	Cox7a2	P35171	M	1	29 ± 2.2					36.3 ± 5.1	0.25
Cytochrome c oxidase subunit 7A2, mitochondrial	Cox7a2	P35171	AM	1	1.00 ± 0.0	1.33 ± 0.3	0.423	1.67 ± 0.3	0.184	1.00 ± 0.0	1
Cytochrome c, somatic	Cycs	P62898	AM	0	1.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	1.67 ± 0.3	0.184
Cytochrome c, somatic	Cycs	P62898	M		177.9 ± 8.3					170.2 ± 12.2	0.63
Cytochrome c-1	Cyc1	D3ZFQ8	AM	0	1.00 ± 0.0	1.67 ± 0.3	0.184	1.67 ± 0.7	0.423	1.67 ± 0.3	0.184
Cytochrome c-1 (Predicted), isoform CRA_c	Cyc1	D3ZFQ8	M		147.3 ± 19.3					133.5 ± 4.3	0.52
Cytochrome P450 2C23	Cyp2c23	P24470	M	1	70.2 ± 5.3					82.1 ± 5.6	0.2
Cytochrome P450 2C23	Cyp2c23	P24470	AM	1	1.00 ± 0.0	12.67 ± 5.	0.173	8.67 ± 3.8	0.184	4.00 ± 1.7	0.225
Cytochrome P450 2D26	Cyp2d26	P10634	M	1	1.6 ± 0.4					1 ± 1	0.56
Cytochrome P450 4A12	Cyp4a12	P24464	M	2	21.4 ± 5.4					18.1 ± 9.9	0.79
Cytochrome P450 4A14	Cyp4a14	P20817	M	2	92.7 ± 20.7					98.8 ± 49.5	0.91
Cytochrome P450 4A14	Cyp4a14	P20817	AM	2	1.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	6.00 ± 0.6	0.013
Cytochrome P450 4A2	Cyp4a2	P20816	M	1	91.2 ± 22					175.2 ± 7.8	0.023
Cytochrome P450 4A2	Cyp4a2	P20816	AM	1	1.00 ± 0.0	10.33 ± 1.	0.023	10.33 ± 1.	0.034	7.33 ± 2.0	0.089
Cytoplasmic aconitate hydratase	Aco1	Q63270	AM	0	5.67 ± 1.5	1.00 ± 0.0	0.085	1.00 ± 0.0	0.085	1.00 ± 0.0	0.085
Cytoplasmic dynein 1 heavy chain 1	Dync1h1	P38650	M		13.3 ± 5.6					3.9 ± 1.3	0.18
Cytoplasmic dynein 1 heavy chain 1	Dync1h1	P38650	C		5.3 ± 2.4	6.3 ± 2.9	0.94			6.3 ± 2.8	0.729
Cytosol aminopeptidase	Lap3	Q68FS4	M		10.5 ± 3.8					11.3 ± 1.1	0.84
Cytosolic 10-formyltetrahydrofolate dehydrogenase	Aldh1l1	P28037	M		12.1 ± 4.5					6 ± 1	0.25
Cytosolic 10-formyltetrahydrofolate dehydrogenase	Aldh1l1	P28037	C		11.0 ± 4.6	19.0 ± 6.1	0.35			12.7 ± 4.8	0.632
Cytosolic non-specific dipeptidase	Cndp2	Q6Q0N1	M		12.7 ± 6.5					4.2 ± 1.2	0.27
Cytosolic non-specific dipeptidase	Cndp2	Q6Q0N1	AM	0	8.67 ± 0.7	1.00 ± 0.0	0.008	1.00 ± 0.0	0.008	1.00 ± 0.0	0.008
Cytosolic non-specific dipeptidase	Cndp2	Q6Q0N1	C		45.7 ± 28.2	39.7 ± 13.5	0.731			17.7 ± 5.5	0.291
D-2-hydroxyglutarate dehydrogenase, mitochondrial	D2hgdh	P84850	M		4.5 ± 2.4					4.5 ± 2.1	0.99
D-3-phosphoglycerate dehydrogenase	Phgdh	O08651	M		4.3 ± 1.7					1.3 ± 0.9	0.16
D-3-phosphoglycerate dehydrogenase	Phgdh	O08651	C		16.3 ± 7.3	19.3 ± 2.4	0.946			8.0 ± 2.3	0.306
D-amino-acid oxidase	Dao	O35078	M		141.3 ± 12.4					174.3 ± 8.6	0.093
D-amino-acid oxidase	Dao	O35078	AM	0	1.00 ± 0.0	3.67 ± 1.2	0.157	1.33 ± 0.3	0.423	1.67 ± 0.7	0.423
D-amino-acid oxidase	Dao	O35078	C		21.3 ± 9.8	14.0 ± 8.1	0.356			12.0 ± 4.2	0.532
D-beta-hydroxybutyrate dehydrogenase, mitochondrial	Bdh1	P29147	M		9.4 ± 4.9					6.3 ± 1	0.57
D-dopachrome decarboxylase	Ddt	P80254	M		8.6 ± 3.2					6.4 ± 2.9	0.63
D-dopachrome decarboxylase	Ddt	P80254	AM	0	2.33 ± 0.3	1.00 ± 0.0	0.057	1.00 ± 0.0	0.057	1.00 ± 0.0	0.057
D-dopachrome decarboxylase	Ddt	P80254	C		1.3 ± 1.3	2.7 ± 2.7	0.886			17.3 ± 8.4	0.061
Dehydrogenase/reductase (SDR family) member 1	Dhrs1	Q6AXY8	M		1.9 ± 1					0 ± 0	0.13
Dehydrogenase/reductase SDR family member 4	Dhrs4	Q8VID1	M		10.1 ± 5.8					5 ± 1.9	0.44
Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	Aldh4a1	P0C2X9	M		173.2 ± 24.9					195.9 ± 14.9	0.48
Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	Aldh4a1	P0C2X9	C		1.3 ± 1.3	9.3 ± 5.0	0.14			0.0 ± 0.0	0.627
Delta-aminolevulinic acid dehydratase	Alad	P06214	M		13.6 ± 4.7					11.7 ± 2.5	0.73
Delta-aminolevulinic acid dehydratase	Alad	P06214	C		20.3 ± 13.4	20.3 ± 13.3	0.905			6.0 ± 3.2	0.393
Deoxyguanosine kinase (Predicted), isoform CRA_a	Dguok	D3ZDE4	M		5.4 ± 0.6					6.3 ± 0.2	0.18
Dihydrofolate reductase	Dhfr	Q920D2	C		6.3 ± 3.5	14.0 ± 2.9	0.103			4.3 ± 2.2	0.891
Dihydrolipoamide branched chain transacylase E2	Dbt	B2GV15	M		44.2 ± 4.5					42.6 ± 2.1	0.77
Dihydrolipoamide branched chain transacylase E2	Dbt	B2GV15	AM	0	1.00 ± 0.0	1.67 ± 0.3	0.184	1.33 ± 0.3	0.423	4.67 ± 1.3	0.111
Dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex), isoform CRA_a	Dlst	G3V6P2	M		50.1 ± 6.6					50.6 ± 0.5	0.95
Dihydrolipoyl dehydrogenase, mitochondrial	Dld	Q6P6R2	M		151.2 ± 18.4					168.2 ± 12.1	0.48
Dihydrolipoyllysine-residue acetyltransferase	Dlat	P08461	AM	0	1.00 ± 0.0	2.67 ± 0.9	0.199	1.67 ± 0.7	0.423	1.00 ± 0.0	1
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	Dlat	P08461	M		40.8 ± 14.1					42.2 ± 7.6	0.93
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial	Dlat	P08461	C		0.0 ± 0.0	0.7 ± 0.7	0.543			1.0 ± 1.0	0.338
Dihydropteridine reductase	Qdpr	P11348	M		1.5 ± 1.5					2.2 ± 1.1	0.75
Dihydropteridine reductase	Qdpr	P11348	C		15.0 ± 2.5	13.0 ± 4.4	0.412			10.7 ± 4.6	0.463
Dihydropyrimidinase	Dpys	Q63150	C		0.7 ± 0.7	2.3 ± 0.3	0.241			0.7 ± 0.7	0.866
Dimethylaniline monooxygenase [N-oxide-forming] 1	Fmo1	P36365	M	1	73 ± 6					57.3 ± 5	0.11
Dimethylaniline monooxygenase [N-oxide-forming] 3	Fmo3	Q9EQ76	M		4.5 ± 2.6					15.1 ± 3.9	0.085
Dimethylaniline monooxygenase [N-oxide-forming] 4	Fmo4	Q8K4B7	M		2.3 ± 1.3					3 ± 0.7	0.62
Dimethylaniline monooxygenase 1	Fmo1	P36365	AM	1	3.33 ± 0.9	8.00 ± 1.5	0.184	5.67 ± 2.3	0.25	6.00 ± 1.2	0.157
Dimethylglycine dehydrogenase	Dmgdh	Q5RKL4	M		47.4 ± 7.7					68.3 ± 2.5	0.06
Dimethylglycine dehydrogenase, mitochondrial	Dmgdh	Q63342	M		41 ± 1.8					75.1 ± 4.7	0.002
Dipeptidase 1	Dpep1	P31430	M		12.4 ± 4.8					11.9 ± 2.4	0.93
Dipeptidase 1	Dpep1	P31430	AM	0	7.33 ± 1.9	7.00 ± 3.5	0.9	14.00 ± 8.	0.578	5.33 ± 0.7	0.368
Dipeptidyl peptidase 2	Dpp7	Q9EPB1	M		2.5 ± 1.9					2.4 ± 1.4	0.99
Dipeptidyl peptidase 2	Dpp7	Q9EPB1	AM	0	1.67 ± 0.3	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184
Dipeptidyl peptidase 2	Dpp7	Q9EPB1	C		4.0 ± 2.3	8.7 ± 1.3	0.098			5.0 ± 1.2	0.411
Dipeptidyl peptidase 3	Dpp3	O55096	C		3.0 ± 0.6	7.0 ± 2.6	0.318			4.0 ± 2.1	0.659
Dipeptidyl peptidase 4	Dpp4	P14740	AM	1	60.67 ± 2.7	34.00 ± 8.	0.112	34.00 ± 5.	0.052	64.67 ± 3.	0.074
Disables homolog 2	Dab2	D3ZGX5	AM	0	16.00 ± 1.7	6.00 ± 1.5	0.003	9.33 ± 2.0	0.063	22.33 ± 2.	0.241
DnaJ (Hsp40) homolog, subfamily C, member 11	Dnajc11	B1WBY5	M		2.3 ± 1.7					0.4 ± 0.4	0.32
DnaJ homolog subfamily A member 1	Dnaja1	P63036	M		5.8 ± 2.4					3 ± 0.9	0.33
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit	Ddost	Q641Y0	M	2	2.4 ± 1.5					5.5 ± 2.8	0.37
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1	Rpn1	P07153	M	1	47 ± 3.8					35.5 ± 2.6	0.065
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2	Rpn2	P25235	M	3	25.2 ± 5.1					12.9 ± 1.8	0.082
Dynactin subunit 2	Dctn2	Q6AYH5	C		1.3 ± 1.3	2.0 ± 1.0	0.992			1.0 ± 1.0	0.722
Dynein light chain 2, cytoplasmic	Dynll2	Q78P75	M		1.6 ± 0.8					0 ± 0	0.12
Ectonucleoside triphosphate diphosphohydrolase 5	Entpd5	Q6P6S9	M	2	8.1 ± 0.8					18.2 ± 2.6	0.018
Ectonucleotide pyrophos.ase/phosphodiesterase fam 3	Enpp3	P97675	AM	1	8.33 ± 0.9	1.33 ± 0.3	0.007	1.33 ± 0.3	0.007	13.33 ± 1.	0.038
Ectonucleotide pyrophos.ase/phosphodiesterase fam 6	Enpp6	B0BND0	AM	0	12.00 ± 3.8	2.33 ± 0.9	0.172	3.33 ± 2.3	0.274	15.00 ± 4.	0.753
Ectonucleotide pyrophosphatase/phosphodiesterase family member 3	Enpp3	P97675	M	1	2 ± 1.4					1.2 ± 0.3	0.62
Ectonucleotide pyrophosphatase/phosphodiesterase family member 6	Enpp6	B0BND0	M		13.4 ± 6.3					6.6 ± 1.8	0.35
EH domain-containing protein 1	Ehd1	Q641Z6	AM	0	5.67 ± 1.5	1.00 ± 0.0	0.085	1.33 ± 0.3	0.133	4.00 ± 1.7	0.653
EH domain-containing protein 1	Ehd1	Q641Z6	M		57.4 ± 19.7					40.5 ± 2.2	0.44
EH domain-containing protein 1	Ehd1	Q641Z6	C		2.7 ± 2.2	0.3 ± 0.3	0.212			0.3 ± 0.3	0.228
ElaC homolog 2 (E. coli)	Elac2	G3V6F5	M		2.7 ± 1.6					2.4 ± 0.4	0.9
Electrogenic sodium bicarbonate cotransporter 1	Slc4a4	Q9JI66	AM	9	24.00 ± 2.5	24.00 ± 6.	1	31.67 ± 0.	0.073	39.00 ± 4.	0.163
Electron transfer flavoprotein subunit alpha, mitochondrial	Etfa	P13803	M		124.5 ± 43.9					160.1 ± 36.3	0.56
Electron transfer flavoprotein subunit alpha, mitochondrial	Etfa	P13803	C		2.3 ± 1.2	3.3 ± 3.3	0.98			1.3 ± 1.3	0.69
Electron transfer flavoprotein subunit beta	Etfb	Q68FU3	M		93 ± 9.4					125.6 ± 6.6	0.046
Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial	Etfdh	Q6UPE1	M		23.8 ± 1.8					24.8 ± 5.5	0.87
Elongation factor 1-alpha	LOC100360413	D3ZC88	AM	0	5.00 ± 1.0	5.00 ± 1.5	1	6.00 ± 1.5	0.225	5.33 ± 0.3	0.667
Elongation factor 1-alpha	LOC100360413	D3ZC88	C		65.3 ± 12.3	70.0 ± 11.7	0.801			75.0 ± 11.2	0.59
Elongation factor 1-alpha 1	Eef1a1	P62630	M		57.9 ± 11.3					45.2 ± 6.3	0.38
Elongation factor 1-gamma	Eef1g	Q68FR6	C		8.3 ± 4.6	5.0 ± 3.5	0.401			0.7 ± 0.7	0.167
Elongation factor 2	Eef2	P05197	M		2.7 ± 1.7					1.9 ± 0.6	0.63
Elongation factor 2	Eef2	P05197	AM	0	3.33 ± 1.2	2.00 ± 1.0	0.27	2.00 ± 1.0	0.423	1.67 ± 0.7	0.199
Elongation factor 2	Eef2	P05197	C		24.3 ± 7.5	38.3 ± 2.8	0.333			20.0 ± 9.2	0.839
Elongation factor G, mitochondrial	Gfm1	Q07803	M		9.5 ± 5.4					6.3 ± 0.2	0.58
Elongation factor Ts, mitochondrial	Tsfm	Q9QYU2	M		4.4 ± 2.3					3.4 ± 0.9	0.68
Elongation factor Tu, mitochondrial	Tufm	P85834	M		75.2 ± 10.2					75.8 ± 6.9	0.96
Endoplasmic reticulum resident protein 29	Erp29	P52555	M	1	1.6 ± 1					1.2 ± 0.8	0.78
Endoplasmin	Hsp90b1	Q66HD0	M		64.2 ± 7.9					59.3 ± 4.8	0.62
Enolase	Eno1	Q5EB49	AM	0	42.33 ± 2.3	1.33 ± 0.3	0.003	1.00 ± 0.0	0.003	3.33 ± 1.3	0.008
Enolase (Fragment)	NA	F1LZ68	M		0.8 ± 0.8					0.3 ± 0.3	0.6
Enolase (Fragment)	N/A	F1M9V3	C		2.0 ± 2.0	1.0 ± 1.0	0.644			1.0 ± 1.0	0.804
Enoyl Coenzyme A hydratase domain containing 2 (Predicted), isoform CRA_a	Echdc2	D3ZIL6	M		4.2 ± 1.3					4.8 ± 0.9	0.69
Enoyl-CoA delta isomerase 1, mitochondrial	Eci1	P23965	M		76.7 ± 6.6					116.3 ± 10.9	0.035
Enoyl-CoA delta isomerase 2, mitochondrial	Eci2	Q5XIC0	M		18.2 ± 5.6					28.8 ± 3.7	0.19
Enoyl-CoA hydratase domain-containing protein 3, mitochondrial	Echdc3	Q3MIE0	M		0.4 ± 0.4					3.9 ± 0.6	0.006
Enoyl-CoA hydratase, mitochondrial	Echs1	P14604	M		29.6 ± 5.7					45.7 ± 2.9	0.063
Enoyl-CoA hydratase, mitochondrial	Echs1	P14604	C		2.7 ± 1.8	6.7 ± 4.4	0.427			0.7 ± 0.7	0.554
ENSRNOP00000016685	NA	D3ZSD6	AM	0	1.67 ± 0.3	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184	1.33 ± 0.3	0.423
Envoplakin (Predicted)	Evpl	G3V765	M		0.4 ± 0.4					3.1 ± 1.2	0.088
Epithelial cell adhesion molecule	Epcam	O55159	M	1	5.1 ± 2.4					6.4 ± 4.2	0.8
Epithelial cell adhesion molecule	Epcam	O55159	AM	1	1.67 ± 0.3	1.67 ± 0.3	1	1.00 ± 0.0	0.184	2.67 ± 0.9	0.225
Epoxide hydrolase 1	Ephx1	P07687	M		11.2 ± 3.4					36.3 ± 5	0.013
Epoxide hydrolase 2	Ephx2	P80299	C		1.0 ± 0.6	6.0 ± 4.2	0.198			1.0 ± 1.0	0.967
Equilibrative nucleoside transporter 3	Slc29a3	Q80WK7	M		7.1 ± 3.4					1.9 ± 1.9	0.24
Equilibrative nucleoside transporter 3	Slc29a3	Q80WK7	AM	11	2.00 ± 0.6	1.00 ± 0.0	0.225	1.00 ± 0.0	0.225	2.00 ± 0.6	1
Erlin-2	Erlin2	B5DEH2	M		0.4 ± 0.4					1.3 ± 1.3	0.55
Erythrocyte protein band 4.1-like 3	Epb4.1l3	A3E0T0	AM	0	2.33 ± 0.3	1.00 ± 0.0	0.057	1.67 ± 0.3	0.184	1.00 ± 0.0	0.057
Erythrocyte protein band 4.1-like 3	Epb4.1l3	A3E0T0	M		61.8 ± 20.8					40.8 ± 6.7	0.39
Erythrocyte protein band 4.1-like 3	Epb4.1l3	A3E0T0	C		1.0 ± 0.0	2.3 ± 0.3	0.267			0.3 ± 0.3	0.143
ES1 protein homolog, mitochondrial	NA	P56571	M		19.1 ± 9.3					24.8 ± 1.1	0.58
Ester hydrolase C11orf54 homolog	NA	Q5U2Q3	M		17.7 ± 8.9					2.2 ± 2.2	0.17
Ester hydrolase C11orf54 homolog	NA	Q5U2Q3	AM	0	3.00 ± 1.2	1.00 ± 0.0	0.225	1.00 ± 0.0	0.225	1.00 ± 0.0	0.225
Ester hydrolase C11orf54 homolog	N/A	Q5U2Q3	C		18.3 ± 11.7	8.7 ± 7.2	0.33			10.3 ± 1.9	0.66
Ethylmalonic encephalopathy 1	Ethe1	B0BNJ4	M		47.3 ± 8.2					55.8 ± 6.5	0.46
Eukaryotic translation initiation factor 2 subunit 1	Eif2s1	P68101	C		1.3 ± 1.3	0.7 ± 0.7	0.599			0.3 ± 0.3	0.514
Eukaryotic translation initiation factor 3 subunit A	Eif3a	Q1JU68	C		1.3 ± 0.9	0.7 ± 0.3	0.64			2.0 ± 2.0	0.765
Eukaryotic translation initiation factor 3 subunit B	Eif3b	Q4G061	C		0.7 ± 0.7	1.0 ± 1.0	0.993			0.0 ± 0.0	0.422
Eukaryotic translation initiation factor 4A1	Eif4a1	Q6P3V8	M		13.2 ± 4					5.7 ± 0.4	0.13
Eukaryotic translation initiation factor 4A1	Eif4a1	Q6P3V8	C		6.0 ± 4.6	19.0 ± 4.4	0.15			7.3 ± 3.9	0.701
Eukaryotic translation initiation factor 5A-1	Eif5a	Q3T1J1	M		3.9 ± 1.2					2.5 ± 1.4	0.45
Eukaryotic translation initiation factor 5A-1	Eif5a	Q3T1J1	C		1.3 ± 0.3	4.3 ± 0.9	0.117			2.3 ± 1.3	0.4
Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial	Ecsit	Q5XIC2	M		4.5 ± 1.2					5.4 ± 0.6	0.53
Excitatory amino acid transporter 3	Slc1a1	P51907	AM	9	6.33 ± 1.7	3.67 ± 2.2	0.56	4.67 ± 2.0	0.199	10.33 ± 1.	0.225
Exportin-1	Xpo1	Q80U96	C		3.0 ± 0.6	3.0 ± 1.7	0.686			1.7 ± 1.7	0.466
Extracellular superoxide dismutase [Cu-Zn]	Sod3	Q08420	M		0.4 ± 0.4					2.7 ± 0.9	0.075
Ezrin	Ezr	P31977	M		111 ± 17.2					88.1 ± 15.7	0.38
Ezrin	Ezr	P31977	AM	0	54.33 ± 6.4	31.33 ± 3.	0.117	50.67 ± 3.	0.641	63.00 ± 7.	0.51
F-actin-capping protein subunit beta	Capzb	Q5XI32	M		5.6 ± 3.2					0.3 ± 0.3	0.18
Fatty acid-binding protein, heart	Fabp3	P07483	C		6.3 ± 4.1	1.0 ± 1.0	0.163			3.7 ± 1.5	0.704
Folate receptor 1 (Adult), isoform CRA_b	Folr1	G3V8M6	M		6.6 ± 2.3					5.2 ± 2.7	0.71
Frataxin, mitochondrial	Fxn	D3ZYW7	M		10.9 ± 3.4					11.3 ± 3.2	0.92
Fructose-1,6-bisphosphatase 1	Fbp1	P19112	M		122.9 ± 34.6					79.1 ± 8.3	0.28
Fructose-1,6-bisphosphatase 1	Fbp1	P19112	AM	0	51.00 ± 3.6	12.00 ± 3.	0	16.33 ± 3.	0.03	7.00 ± 3.1	0
Fructose-1,6-bisphosphatase 1	Fbp1	P19112	C		376.3 ± 90.6	417.3 ± 51.2	0.963			360.0 ± 23.0	0.652
Fructose-bisphosphate aldolase	Aldob	Q66HT1	AM	0	42.00 ± 3.1	22.67 ± 1.	0.007	28.00 ± 2.	0.026	46.33 ± 11	0.795
Fructose-bisphosphate aldolase	Aldob	Q66HT1	M		7.9 ± 1.1					5.4 ± 0.8	0.97
Fructose-bisphosphate aldolase	Aldob	Q66HT1	C		457.0 ± 65.3	446.3 ± 47.5	0.556			559.7 ± 26.2	0.276
Fructose-bisphosphate aldolase A	Aldoa	P05065	M		131.3 ± 25.9					132.6 ± 14.1	0.12
Fructose-bisphosphate aldolase A	Aldoa	P05065	AM	0	1.67 ± 0.3	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184
Fructose-bisphosphate aldolase A	Aldoa	P05065	C		17.3 ± 5.5	28.0 ± 7.9	0.468			21.3 ± 5.5	0.623
Fumarate hydratase 1	Fh1	Q5M964	M		124.4 ± 63.3					122.5 ± 5.5	0.98
Fumarate hydratase 1	Fh1	Q5M964	C		0.3 ± 0.3	3.0 ± 1.5	0.141			0.7 ± 0.7	0.833
Fumarylacetoacetase	Fah	D4AEK8	AM	0	2.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	1.00 ± 0.0	1
Fumarylacetoacetase	Fah	P25093	M		5.8 ± 3.3					4.6 ± 2.8	0.79
Fumarylacetoacetase	Fah	P25093	C		89.3 ± 37.8	48.3 ± 41.3	0.285			66.3 ± 29.7	0.755
Fumarylacetoacetate hydrolase domain-containing protein 2	Fahd2	B2RYW9	M		29.7 ± 5.9					61.1 ± 3.9	0.011
Gamma-glutamyltranspeptidase 1	Ggt1	P07314	M	1	9.2 ± 4.7					22.4 ± 4.9	0.12
Gamma-glutamyltranspeptidase 1	Ggt1	P07314	AM	1	26.33 ± 2.2	14.00 ± 2.	0.003	15.33 ± 2.	0.14	43.33 ± 2.	0.001
GAPDH [NAD+], cytoplasmic	Gpd1	O35077	AM	0	2.00 ± 0.6	1.00 ± 0.0	0.225	1.00 ± 0.0	0.225	1.00 ± 0.0	0.225
Gba3 protein	Gba3	B5DF30	AM	0	2.33 ± 0.9	1.00 ± 0.0	0.27	1.00 ± 0.0	0.27	1.00 ± 0.0	0.27
GDNF-inducible zinc finger protein 1	Gzf1	D3ZUU2	M		1.2 ± 0.8					0.9 ± 0.6	0.76
Gelsolin	Gsn	Q68FP1	M		13.3 ± 5.3					21.5 ± 1.6	0.21
General vesicular transport factor p115	Uso1	P41542	C		4.0 ± 2.1	6.7 ± 1.9	0.753			2.7 ± 2.2	0.574
Glucose-6-phosphatase	G6pc	P43428	M	9	3.1 ± 1.4					4.8 ± 0.2	0.28
Glucose-6-phosphate isomerase	Gpi	Q6P6V0	M		31.5 ± 12					17.4 ± 4.9	0.34
Glucose-6-phosphate isomerase	Gpi	Q6P6V0	AM	0	13.33 ± 3.2	1.00 ± 0.0	0.061	1.00 ± 0.0	0.061	2.00 ± 0.6	0.075
Glucose-6-phosphate isomerase	Gpi	Q6P6V0	C		57.3 ± 0.9	83.7 ± 13.9	0.194			47.0 ± 2.1	0.45
Glucosidase, beta, acid 3 (Cytosolic) (Predicted)	Gba3	G3V8Y1	C		14.3 ± 11.3	9.7 ± 3.8	0.644			4.3 ± 3.4	0.39
Glutamate carboxypeptidase 2	Folh1	P70627	M	1	9.2 ± 2					17.7 ± 5.7	0.23
Glutamate carboxypeptidase 2	Folh1	P70627	AM	1	5.00 ± 1.5	2.67 ± 0.7	0.336	6.67 ± 3.2	0.444	13.33 ± 3.	0.133
Glutamate dehydrogenase 1, mitochondrial	Glud1	P10860	M		431.5 ± 45.3					715.8 ± 8	0.004
Glutamate dehydrogenase 1, mitochondrial	Glud1	P10860	AM	0	1.00 ± 0.0	1.33 ± 0.3	0.423	1.33 ± 0.3	0.423	5.33 ± 0.9	0.039
Glutamate dehydrogenase 1, mitochondrial	Glud1	P10860	C		1.7 ± 0.7	6.3 ± 1.2	0.156			4.3 ± 2.0	0.218
Glutamate--cysteine ligase catalytic subunit	Gclc	P19468	M		1.3 ± 1.3					1.3 ± 0.9	1
Glutamate--cysteine ligase catalytic subunit	Gclc	P19468	C		0.0 ± 0.0	2.0 ± 2.0	0.28			0.3 ± 0.3	0.774
Glutaminase kidney isoform, mitochondrial	Gls	P13264	M		17.7 ± 2.2					59.3 ± 10.7	0.019
Glutamine synthetase	Glul	P09606	C		7.3 ± 5.0	1.3 ± 1.3	0.176			0.7 ± 0.3	0.146
Glutamyl aminopeptidase	Enpep	P50123	M	1	38.9 ± 10.5					20.8 ± 8.1	0.24
Glutamyl aminopeptidase	Enpep	P50123	AM	1	25.00 ± 5.6	13.00 ± 1.	0.185	12.67 ± 2.	0.256	14.67 ± 3.	0.364
Glutaredoxin-3	Glrx3	Q9JLZ1	C		3.3 ± 2.3	2.3 ± 1.5	0.62			1.0 ± 0.6	0.347
Glutaryl-Coenzyme A dehydrogenase (Predicted)	Gcdh	D3ZT90	M		51.9 ± 12					57.6 ± 5.6	0.69
Glutathione peroxidase	Gpx3	F1LPZ5	C		0.0 ± 0.0	1.3 ± 1.3	0.267			0.0 ± 0.0	1
Glutathione peroxidase 1	Gpx1	P04041	M		98.5 ± 12.2					119.8 ± 12.6	0.29
Glutathione peroxidase 1	Gpx1	P04041	AM	0	3.00 ± 1.0	4.33 ± 1.5	0.508	4.67 ± 0.9	0.038	8.00 ± 2.0	0.238
Glutathione peroxidase 1	Gpx1	P04041	C		8.7 ± 4.6	17.7 ± 2.4	0.076			6.7 ± 1.5	0.862
Glutathione S-transferase alpha-1	Gsta1	P00502	M		28.9 ± 5.8					31 ± 2	0.74
Glutathione S-transferase alpha-1	Gsta1	P00502	AM	0	6.33 ± 1.7	1.00 ± 0.0	0.085	1.00 ± 0.0	0.085	1.33 ± 0.3	0.082
Glutathione S-transferase alpha-1	Gsta1	P00502	C		200.0 ± 29.1	213.0 ± 8.0	0.742			201.7 ± 42.2	0.789
Glutathione S-transferase alpha-3	Gsta3	P04904	M		119.1 ± 34.3					96.2 ± 10.8	0.56
Glutathione S-transferase alpha-3	Gsta3	P04904	AM	0	11.00 ± 6.2	1.00 ± 0.0	0.251	1.00 ± 0.0	0.251	5.33 ± 3.4	0.581
Glutathione S-transferase alpha-3	Gsta3	P04904	C		157.0 ± 52.5	216.7 ± 52.1	0.792			197.3 ± 73.7	0.552
Glutathione S-transferase alpha-4	Gsta4	P14942	C		6.0 ± 3.1	15.3 ± 3.4	0.18			13.3 ± 4.4	0.14
Glutathione S-transferase kappa 1	Gstk1	P24473	M		6.5 ± 3.3					11.6 ± 3.8	0.36
Glutathione S-transferase mu 4	Gstm4	Q5BK56	M		2 ± 1.4					3.4 ± 1.7	0.54
Glutathione S-transferase P	Gstp1	P04906	M		9 ± 7.9					6.9 ± 1.4	0.81
Glutathione S-transferase P	Gstp1	P04906	AM	0	2.67 ± 0.9	1.00 ± 0.0	0.199	1.00 ± 0.0	0.199	1.00 ± 0.0	0.199
Glutathione S-transferase P	Gstp1	P04906	C		3.0 ± 0.6	6.7 ± 1.3	0.372			10.7 ± 3.4	0.026
Glutathione S-transferase theta-2	Gstt2	P30713	C		1.7 ± 0.9	1.0 ± 1.0	0.475			1.0 ± 0.6	0.702
Glyceraldehyde-3-phosphate dehydrogenase	Gapdh	P04797	M		162.2 ± 43.9					112.8 ± 10.9	0.34
Glyceraldehyde-3-phosphate dehydrogenase	Gapdh	P04797	AM	0	34.33 ± 2.7	1.33 ± 0.3	0.006	3.67 ± 0.3	0.006	15.67 ± 3.	0.086
Glyceraldehyde-3-phosphate dehydrogenase	Gapdh-ps2	D3ZGY4	C		276.7 ± 16.0	273.3 ± 29.9	0.378			240.3 ± 43.0	0.696
Glyceraldehyde-3-phosphate dehydrogenase (Fragment)	N/A	F1M5I8	C		11.7 ± 6.4	12.0 ± 7.9	0.903			7.3 ± 3.8	0.603
Glycerate kinase	Glyctk	Q0VGK3	M		22.9 ± 9.6					22.3 ± 1.3	0.96
Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic	Gpd1	O35077	M		13.3 ± 5.2					13 ± 3.7	0.96
Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic	Gpd1	O35077	C		37.0 ± 16.8	49.7 ± 15.9	0.607			9.3 ± 5.4	0.161
Glycine amidinotransferase, mitochondrial	Gatm	P50442	M		393.7 ± 36.1					299.1 ± 32.9	0.12
Glycine amidinotransferase, mitochondrial	Gatm	P50442	C		27.0 ± 3.2	59.0 ± 12.2	0.118			25.7 ± 11.2	0.952
Glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase), isoform CRA_b	Gcat	G3V7E4	M		16 ± 5.5					15.6 ± 3.4	0.96
Glycine cleavage system H protein, mitochondrial	Gcsh	Q5I0P2	M		37.9 ± 6.9					36.5 ± 1.8	0.85
Glycine N-acyltransferase	Glyat	Q5PQT3	M		160.5 ± 22.4					212.5 ± 15.4	0.13
Glycine N-acyltransferase	Glyat	Q5PQT3	AM	0	1.00 ± 0.0	2.00 ± 1.0	0.423	1.33 ± 0.3	0.423	1.33 ± 0.3	0.423
Glycine N-acyltransferase-like protein Keg1	Keg1	Q9Z2Y0	M		3.4 ± 2.2					6.6 ± 1.2	0.25
Glycine N-methyltransferase	Gnmt	P13255	C		1.7 ± 1.2	2.0 ± 1.0	0.999			1.3 ± 1.3	0.775
Glycylpeptide N-tetradecanoyltransferase 1	Nmt1	Q8K1Q0	C		0.0 ± 0.0	1.7 ± 0.3	0.001			0.0 ± 0.0	1
Glyoxalase domain-containing protein 4	Glod4	Q5I0D1	C		2.0 ± 1.5	2.7 ± 1.7	0.634			0.0 ± 0.0	0.339
G-protein coupled receptor family C group 5 member C	Gprc5c	Q3KRC4	M	8	1.9 ± 1.9					2.1 ± 0.4	0.91
Granulins	Grn	P23785	M		7.5 ± 3.7					10.5 ± 2.6	0.54
Grhpr protein	Grn	B0BN46	AM	0	2.00 ± 0.6	1.00 ± 0.0	0.225	1.00 ± 0.0	0.225	1.33 ± 0.3	0.529
GrpE protein homolog 1, mitochondrial	Grpel1	P97576	M		10.3 ± 0.9					16.4 ± 1.9	0.04
Guanine nucleotide binding protein (G protein), gamma 12, isoform CRA_a	Gng12	G3V6P8	M		1.5 ± 1					4.6 ± 1.5	0.15
Guanine nucleotide-binding protein G	Gnb2	P54313	AM	0	1.33 ± 0.3	1.67 ± 0.3	0.423	1.00 ± 0.0	0.423	2.67 ± 1.7	0.547
Guanine nucleotide-binding protein G	Gnai2	P04897	AM	0	1.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	2.33 ± 0.7	0.184
Guanine nucleotide-binding protein G(i) subunit alpha-1	Gnai1	P10824	M		2.5 ± 1.9					2.4 ± 1.2	0.99
Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas	Gnas	Q63803	M		9.8 ± 3.7					6.7 ± 1.6	0.48
Guanine nucleotide-binding protein subunit alpha-11	Gna11	Q9JID2	M		4.3 ± 2.2					3 ± 0.3	0.57
Guanine nucleotide-binding protein subunit beta-2-like 1	Gnb2l1	P63245	C		9.7 ± 2.2	13.0 ± 6.8	0.885			15.3 ± 5.9	0.45
Haloacid dehalogenase-like hydrolase domain containing 3	Hdhd3	B2RYT7	M		7 ± 3.8					4.5 ± 1.1	0.56
Heat shock cognate 71 kDa protein	Hspa8	P63018	M		94.3 ± 25.1					73.2 ± 3.8	0.45
Heat shock cognate 71 kDa protein	Hspa8	P63018	AM	0	20.33 ± 1.8	4.33 ± 2.8	0.017	6.33 ± 2.9	0.073	5.33 ± 0.9	0.01
Heat shock cognate 71 kDa protein	Hspa8	P63018	C		78.3 ± 26.5	105.3 ± 39.6	0.556			59.0 ± 7.0	0.743
Heat shock protein 105 kDa	Hsph1	Q66HA8	C		0.3 ± 0.3	1.0 ± 0.6	0.368			0.3 ± 0.3	0.938
Heat shock protein 75 kDa, mitochondrial	Trap1	Q5XHZ0	M		21.8 ± 2.7					18.8 ± 0.4	0.32
Heat shock protein HSP 90-alpha	Hsp90aa1	P82995	M		30.8 ± 11.2					12 ± 3.8	0.19
Heat shock protein HSP 90-alpha	Hsp90aa1	P82995	C		66.3 ± 23.4	92.7 ± 20.3	0.328			91.0 ± 15.6	0.058
Heat shock protein HSP 90-beta	Hsp90ab1	P34058	M		51.3 ± 21.5					35.7 ± 5.9	0.52
Heat shock protein HSP 90-beta	Hsp90ab1	P34058	AM	0	20.00 ± 1.0	9.33 ± 2.0	0.013	5.67 ± 3.3	0.072	3.67 ± 2.7	0.038
Heat shock protein HSP 90-beta	Hsp90ab1	P34058	C		90.0 ± 18.8	136.0 ± 18.4	0.11			109.3 ± 19.4	0.096
Hemopexin	Hpx	P20059	M	1	7.8 ± 2.3					14.8 ± 3.7	0.18
Hepatitis B virus x interacting protein (Predicted), isoform CRA_a	Hbxip	D3ZF11	M		4 ± 2					4 ± 2	0.99
Heterogeneous nuclear ribonucleoprotein K	Hnrnpk	P61980	M		3 ± 2.5					1 ± 0.6	0.46
Heterogeneous nuclear ribonucleoprotein K	Hnrnpk	P61980	C		9.0 ± 4.6	3.3 ± 2.8	0.147			3.3 ± 1.8	0.245
High density lipoprotein binding protein	Hdlbp	Q3KRF2	C		0.0 ± 0.0	2.7 ± 2.2	0.298			1.3 ± 1.3	0.492
Hippocalcin-like protein 1	Hpcal1	P62749	AM	0	1.00 ± 0.0	1.33 ± 0.3	0.423	1.33 ± 0.3	0.423	1.33 ± 0.3	0.423
Histidine triad nucleotide binding protein 2 (Predicted), isoform CRA_a	Hint2	D4AB01	M		24.8 ± 3.8					33.7 ± 2.3	0.11
Histidine triad nucleotide-binding protein 1	Hint1	P62959	M		1.3 ± 1.3					2.8 ± 2	0.55
Histone cell cycle regulation defective interacting protein 5 (Predicted), isoform CRA_a	Nfu1	D3ZA85	M		4.2 ± 1					3.8 ± 1.6	0.84
Histone H1.2	Hist1h1c	P15865	AM	0	1.00 ± 0.0	2.00 ± 1.0	0.423	1.67 ± 0.7	0.423	1.00 ± 0.0	1
Histone H2A	LOC680322	D3ZZ29	M		21.5 ± 4					20.5 ± 2.2	0.83
Histone H2A type 1-C	NA	P0C169	AM	0	1.33 ± 0.3	17.67 ± 1.	0.013	18.00 ± 1.	0.005	13.67 ± 0.	0.001
Histone H2B	Hist1h2bm	D3ZNH4	AM	0	3.00 ± 1.2	19.67 ± 1.	0.03	16.67 ± 2.	0.038	9.33 ± 3.4	0.281
Histone H2B	Hist1h2bf	D3Z8U0	M		6.6 ± 3.3					2.3 ± 2.3	0.35
Histone H3	Hist1h2ail	D3ZJ08	AM	0	1.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	1.67 ± 0.3	0.184
Histone H4	Hist1h4b	P62804	AM	0	1.00 ± 0.0	19.67 ± 3.	0.031	11.00 ± 2.	0.041	10.67 ± 0.	0.005
Histone H4	Hist1h4b	P62804	M		6.7 ± 2.3					9.6 ± 1.2	0.31
Hsc70-interacting protein	St13	P50503	M		3.7 ± 3.7					0 ± 0	0.37
Hsc70-interacting protein	St13	P50503	C		1.3 ± 1.3	2.7 ± 2.7	0.631			0.7 ± 0.3	0.899
Hsp90 co-chaperone Cdc37	Cdc37	Q63692	C		1.3 ± 0.9	2.7 ± 1.8	0.631			0.7 ± 0.3	0.654
HtrA serine peptidase 2	Htra2	B0BNB9	M	1	3 ± 2					4.8 ± 0.9	0.45
Hydroxyacid oxidase 2	Hao2	Q07523	M		256.5 ± 57.5					361.1 ± 20	0.16
Hydroxyacid oxidase 2	Hao2	Q07523	AM	0	8.00 ± 3.5	1.00 ± 0.0	0.181	1.00 ± 0.0	0.181	1.00 ± 0.0	0.181
Hydroxyacid oxidase 2	Hao2	Q07523	C		735.0 ± 141.6	1001.0 ± 178.2	0.253			778.0 ± 87.2	0.277
Hydroxyacid-oxoacid transhydrogenase, mitochondrial	Adhfe1	Q4QQW3	M		12.4 ± 2.6					15.3 ± 3.5	0.53
Hydroxyacyl-coA dehydrogenase, mitochondrial	Hadh	Q9WVK7	AM	0	1.00 ± 0.0	1.67 ± 0.3	0.184	3.33 ± 2.3	0.423	3.00 ± 2.0	0.423
Hydroxyacyl-Coenzyme A dehydrogenase type II	Hsd17b10	B0BMW2	AM	0	1.00 ± 0.0	11.33 ± 0.	0.001	10.33 ± 1.	0.037	1.00 ± 0.0	1
Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial	Hadh	Q9WVK7	M		163.3 ± 15.1					154.3 ± 3.1	0.59
Hydroxymethylglutaryl-CoA lyase, mitochondrial	Hmgcl	P97519	M		20.4 ± 6.7					18.7 ± 2.3	0.82
Hydroxymethylglutaryl-CoA synthase, mitochondrial	Hmgcs2	P22791	M		0 ± 0					2.8 ± 1.1	0.063
Hydroxysteroid dehydrogenase-like protein 2	Hsdl2	Q4V8F9	M		14.7 ± 4.4					20 ± 0.2	0.29
Hypothetical LOC304650 (Predicted), isoform CRA_b	RGD1310262	D4A1K4	M		4.9 ± 2.3					5.4 ± 2.4	0.89
Hypoxanthine-guanine phosphoribosyltransferase	Hprt1	P27605	M		1.2 ± 0.7					1.3 ± 0.8	0.96
Hypoxia up-regulated protein 1	Hyou1	Q63617	M	1	1.5 ± 1.5					5.5 ± 1.7	0.15
Inosine triphosphate pyrophosphatase	Itpa	D3ZW55	M		5.4 ± 1.1					2.7 ± 0.6	0.092
Inositol oxygenase	Miox	Q9QXN4	C		4.7 ± 0.9	2.3 ± 1.9	0.245			2.3 ± 1.9	0.446
Integrator complex subunit 11	Cpsf3l	Q3MHC2	M		2.6 ± 1.5					2.7 ± 0.6	0.94
Integrin beta-1	Itgb1	P49134	M	1	9 ± 3.4					3.9 ± 1.5	0.23
Integrin, alpha 6, isoform CRA_a	Itga6	G3V667	M	1	2.1 ± 2.1					2.2 ± 0.9	0.98
Inter-alpha trypsin inhibitor, heavy chain 1 (Predicted), isoform CRA_a	Itih1	B2RYM3	M		0 ± 0					2.4 ± 1.6	0.19
Inter-alpha-trypsin inhibitor heavy chain H3	Itih3	Q63416	M		5.8 ± 2					8.1 ± 0.6	0.33
Iodotyrosine dehalogenase 1	Iyd	Q5BK17	M	1	1.2 ± 1.2					3.9 ± 0.9	0.12
IQ motif containing GTPase activating protein 1 (Predicted), isoform CRA_b	Iqgap1	G3V7Q7	M		2.4 ± 1.3					0.4 ± 0.4	0.21
Isoamyl acetate-hydrolyzing esterase 1 homolog	Iah1	Q711G3	C		2.3 ± 1.5	3.0 ± 1.2	0.91			2.7 ± 0.7	0.819
Isochorismatase domain-containing protein 2, mitochondrial	Isoc2	Q5U3Z3	M		4.4 ± 2.5					3.8 ± 1.6	0.85
Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial	Idh3B	Q68FX0	M		42.1 ± 12					42.7 ± 7.4	0.97
Isocitrate dehydrogenase [NADP] cytoplasmic	Idh1	P41562	M		86.7 ± 43.1					20.8 ± 5.3	0.2
Isocitrate dehydrogenase [NADP] cytoplasmic	Idh1	P41562	AM	0	8.00 ± 1.5	1.00 ± 0.0	0.045	1.00 ± 0.0	0.045	1.00 ± 0.0	0.045
Isocitrate dehydrogenase [NADP] cytoplasmic	Idh1	P41562	C		103.0 ± 49.7	101.7 ± 17.7	0.827			63.7 ± 8.7	0.451
Isocitrate dehydrogenase [NADP], mitochondrial	Idh2	P56574	M		371.5 ± 42.9					382.6 ± 12.6	0.82
Isocitrate dehydrogenase [NADP], mitochondrial	Idh2	P56574	C		8.0 ± 4.9	23.3 ± 7.4	0.18			10.7 ± 6.2	0.571
Isocitrate dehydrogenase 3 (NAD), gamma	Idh3g	Q5XIJ3	M		42.5 ± 7.1					27.8 ± 4.8	0.16
Isoform 1 of Ectonucleotide pyrophosphatase/phosphodiesterase family member 1	Enpp1	Q924C3	M	1	4.6 ± 2.6					2.5 ± 1.2	0.49
Isoform 11-HSD1B of Corticosteroid 11-beta-dehydrogenase isozyme 1	Hsd11b1	P16232	M		0 ± 0					1 ± 1	0.37
Isoform 2 of Adenylate kinase 2, mitochondrial	Ak2	P29410	M		62.3 ± 7.9					91.2 ± 13.3	0.13
Isoform 2 of Adenylate kinase 2, mitochondrial	Ak2	P29410	C		11.0 ± 3.2	12.0 ± 1.2	0.782			7.7 ± 1.3	0.439
Isoform 2 of Alpha-adducin	Add1	Q63028	M		7.9 ± 4.2					5.4 ± 1.9	0.61
Isoform 2 of AP-2 complex subunit beta	Ap2b1	P62944	M		13.2 ± 3.4					10.2 ± 1.8	0.47
Isoform 2 of Basigin	Bsg	P26453	M	1	65 ± 11.7					36.5 ± 6.6	0.1
Isoform 2 of Brain-specific angiogenesis inhibitor 1-associated protein 2	Baiap2	Q6GMN2	M		3.1 ± 1.1					5.8 ± 1.6	0.23
Isoform 2 of Cadherin-related family member 5	Cdhr5	Q9JIK1	M	1	20.6 ± 5.8					17.9 ± 2.3	0.69
Isoform 2 of Catechol O-methyltransferase	Comt	P22734	M	1	8.4 ± 2.7					8.7 ± 1.4	0.94
Isoform 2 of Catechol O-methyltransferase	Comt	P22734	C		28.0 ± 10.6	30.0 ± 9.9	0.955			29.7 ± 16.0	0.715
Isoform 2 of Cytosol aminopeptidase	Lap3	Q68FS4	C		12.3 ± 6.7	20.3 ± 6.9	0.355			6.0 ± 2.9	0.558
Isoform 2 of Dynamin-like 120 kDa protein, mitochondrial	Opa1	Q2TA68	M		25.7 ± 12.6					19.4 ± 1.7	0.65
Isoform 2 of Electrogenic sodium bicarbonate cotransporter 1	Slc4a4	Q9JI66	M	9	124.2 ± 13					95.2 ± 15.3	0.22
Isoform 2 of Endoplasmin	Hsp90b1	Q66HD0	C		8.3 ± 1.8	9.7 ± 2.2	0.967			5.7 ± 3.5	0.566
Isoform 2 of Fibrinogen alpha chain	Fga	P06399	M		2.3 ± 0.1					4.3 ± 1.7	0.31
Isoform 2 of Protein transport protein Sec31A	Sec31a	Q9Z2Q1	M		1.2 ± 1.2					1.9 ± 1.1	0.67
Isoform 2 of Sodium/potassium-transporting ATPase subunit gamma	Fxyd2	Q04679	M	1	17.2 ± 7					8.7 ± 1.7	0.3
Isoform 2 of Solute carrier family 22 member 1	Slc22a1	Q63089	M	12	5.9 ± 3.6					0.7 ± 0.7	0.22
Isoform 2 of Trimethyllysine dioxygenase, mitochondrial	Tmlhe	Q91ZW6	M		21.2 ± 14.9					42.4 ± 14.4	0.36
Isoform 2 of Voltage-dependent anion-selective channel protein 3	Vdac3	Q9R1Z0	M		13.3 ± 7.2					20.4 ± 3.4	0.42
Isoform A2 of Heterogeneous nuclear ribonucleoproteins A2/B1	Hnrnpa2b1	A7VJC2	C		23.3 ± 3.8	39.7 ± 19.5	0.575			40.7 ± 19.4	0.408
Isoform Cytoplasmic of Cysteine desulfurase, mitochondrial	Nfs1	Q99P39	M		8.7 ± 2					11.1 ± 2.3	0.45
Isoform Cytoplasmic of Fumarate hydratase, mitochondrial	Fh	P14408	M		167.9 ± 34.9					134.9 ± 7.7	0.41
Isoform Cytoplasmic+peroxisomal of Peroxiredoxin-5, mitochondrial	Prdx5	Q9R063	M		38.3 ± 6.1					33.4 ± 6.1	0.6
Isoform Cytoplasmic+peroxisomal of Peroxiredoxin-5, mitochondrial	Prdx5	Q9R063	C		13.3 ± 8.4	12.3 ± 6.4	0.825			6.3 ± 2.6	0.528
Isoform Gamma-2 of Serine/threonine-protein phosphatase PP1-gamma catalytic subunit	Ppp1cc	P63088	M		1.9 ± 1.4					2.5 ± 1.3	0.77
Isoform II of V-type proton ATPase 116 kDa subunit a isoform 1	Atp6v0a1	P25286	M	6	7.4 ± 2.5					1.6 ± 1.1	0.094
Isoform III of Cystathionine beta-synthase	Cbs	P32232	M		5.9 ± 2					1.3 ± 0.9	0.091
Isoform III of Cystathionine beta-synthase	Cbs	P32232	C		4.0 ± 1.0	1.3 ± 0.7	0.185			2.3 ± 1.5	0.365
Isoform Long of Annexin A2	Anxa2	Q07936	M		0.8 ± 0.4					2.5 ± 1.4	0.3
Isoform L-type of Pyruvate kinase isozymes R/L	Pklr	P12928	C		4.7 ± 1.2	2.7 ± 0.7	0.34			2.7 ± 1.8	0.478
Isoform M2 of Pyruvate kinase isozymes M1/M2	Pkm2	P11980	M		1.6 ± 0.4					0.4 ± 0.4	0.064
Isoform Non-brain of Clathrin light chain A	Clta	P08081	M		2.8 ± 1.8					1.2 ± 0.4	0.44
Isoform Non-brain of Clathrin light chain A	Clta	P08081	C		2.3 ± 2.3	2.3 ± 2.3	0.966			0.0 ± 0.0	0.409
Isoform p59 of Disabled homolog 2	Dab2	O88797	M		27.6 ± 10.1					24.9 ± 3.5	0.81
Isoform SERCA2A of Sarcoplasmic/endoplasmic reticulum calcium ATPase 2	Atp2a2	P11507	M	8	5.7 ± 1.3					7.2 ± 1.6	0.49
Isoform Short of 14-3-3 protein beta/alpha	Ywhab	P35213	C		1.3 ± 1.3	11.3 ± 6.8	0.086			0.7 ± 0.7	0.962
Isoform Short of Brain protein 44	Brp44	P38718	M		18.5 ± 7.4					28.7 ± 8.1	0.4
Isovaleryl-CoA dehydrogenase, mitochondrial	Ivd	P12007	M		43 ± 9.9					45.9 ± 3	0.79
Junction plakoglobin	Jup	Q6P0K8	M		1.9 ± 1.9					0.9 ± 0.6	0.64
Keratin, type I cytoskeletal 17	Krt17	Q6IFU8	C		0.7 ± 0.7	0.0 ± 0.0	0.267			0.0 ± 0.0	0.267
Keratin, type II cytoskeletal 1	Krt1	Q6IMF3	C		6.0 ± 3.5	3.0 ± 3.0	0.348			1.7 ± 0.3	0.243
Keratin, type II cytoskeletal 5	Krt5	Q6P6Q2	C		15.0 ± 12.1	2.0 ± 2.0	0.255			1.3 ± 1.3	0.241
Ketohexokinase	Khk	Q02974	C		13.0 ± 5.1	8.3 ± 2.9	0.338			9.7 ± 3.5	0.643
Kinesin-1 heavy chain	Kif5b	Q2PQA9	C		0.7 ± 0.3	1.7 ± 1.2	0.534			1.7 ± 1.2	0.48
Kynurenine 3-monooxygenase	Kmo	O88867	M	2	11.5 ± 4.3					8.9 ± 2.2	0.62
Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial	Aadat	Q64602	M		6.8 ± 2.2					16.3 ± 4.6	0.13
Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial	Aadat	Q64602	C		1.0 ± 0.6	2.3 ± 0.9	0.564			1.3 ± 1.3	0.843
Kynurenine--oxoglutarate transaminase 1, mitochondrial	Ccbl1	Q08415	M		33.2 ± 4.4					34.9 ± 3.1	0.78
Kynurenine--oxoglutarate transaminase 3	Ccbl2	Q58FK9	M		1.1 ± 1.1					1.2 ± 0.3	0.93
Lactamase, beta	Lactb	D3ZFJ6	AM	0	1.00 ± 0.0	2.33 ± 0.9	0.27	2.33 ± 0.3	0.057	1.00 ± 0.0	1
Lactamase, beta (Predicted)	Lactb	D3ZFJ6	M		8.7 ± 1.9					3.9 ± 1.6	0.11
Lambda-crystallin homolog	Cryl1	Q811X6	C		25.3 ± 6.2	45.3 ± 3.0	0.375			28.7 ± 10.4	0.735
Laminin, alpha 1	Lama1	D4A409	M	1	2.3 ± 1.2					2.4 ± 1.2	0.93
L-asparaginase	Asrgl1	Q8VI04	C		0.0 ± 0.0	0.3 ± 0.3	0.735			1.0 ± 1.0	0.285
Legumain	Lgmn	Q9R0J8	M		7.6 ± 0.8					6.6 ± 2.7	0.74
Legumain	Lgmn	Q9R0J8	AM	0	5.00 ± 2.1	1.33 ± 0.3	0.187	2.00 ± 1.0	0.286	1.00 ± 0.0	0.195
Legumain	Lgmn	Q9R0J8	C		4.3 ± 2.6	3.3 ± 3.3	0.706			2.3 ± 2.3	0.738
LETM1 and EF-hand domain-containing protein 1, mitochondrial	Letm1	Q5XIN6	M	1	50.3 ± 8.2					39 ± 12.4	0.49
Leucine-rich PPR motif-containing protein, mitochondrial	Lrpprc	Q5SGE0	M		64.2 ± 22.1					60.7 ± 7.5	0.89
Leucine-rich repeat-containing protein 59	Lrrc59	Q5RJR8	M	1	11.6 ± 1.8					16.9 ± 4.5	0.33
Leukocyte elastase inhibitor A	Serpinb1a	Q4G075	C		1.0 ± 0.6	2.3 ± 1.5	0.444			0.0 ± 0.0	0.387
Liver carboxylesterase 3	Ces1	Q63108	M		3.8 ± 3.8					2.2 ± 2.2	0.72
Liver carboxylesterase 4	NA	Q64573	M		156.9 ± 39.3					215.9 ± 14.3	0.23
Liver carboxylesterase 4	N/A	Q64573	C		8.0 ± 4.9	10.3 ± 9.4	0.91			5.3 ± 3.2	0.939
Liver carboxylesterase B-1	NA	Q63010	M		105.2 ± 28.2					148.9 ± 18.5	0.26
Liver carboxylesterase B-1	NA	Q63010	AM	0	3.33 ± 1.9	1.00 ± 0.0	0.336	1.00 ± 0.0	0.336	2.33 ± 0.7	0.58
L-lactate dehydrogenase A chain	Ldha	P04642	M		0.8 ± 0.8					1.6 ± 1.1	0.59
L-lactate dehydrogenase A chain	Ldha	P04642	C		31.7 ± 12.5	26.0 ± 12.5	0.612			34.3 ± 8.8	0.84
L-lactate dehydrogenase B chain	Ldhb	P42123	M		60.2 ± 24.4					31.6 ± 8.4	0.33
L-lactate dehydrogenase B chain	Ldhb	P42123	AM	0	20.33 ± 2.4	8.33 ± 0.3	0.029	5.00 ± 1.0	0.04	2.67 ± 1.2	0.031
L-lactate dehydrogenase B chain	Ldhb	P42123	C		73.7 ± 15.2	97.3 ± 36.5	0.687			67.7 ± 10.3	0.901
Lman2 protein	Lman2	B0BNG3	M	1	2.7 ± 1					2.4 ± 0.3	0.81
LOC685322 protein	LOC685322	B2RYX1	AM	1	1.00 ± 0.0	2.33 ± 1.3	0.423	1.33 ± 0.3	0.423	1.00 ± 0.0	1
Lon protease homolog 2, peroxisomal	Lonp2	Q3MIB4	M		1.2 ± 1.2					2.1 ± 0.3	0.45
Lon protease homolog, mitochondrial	Lonp1	Q924S5	M		86.6 ± 10.1					57.5 ± 2.8	0.049
Long-chain specific acyl-CoA dehydrogenase, mitochondrial	Acadl	P15650	M		90.3 ± 6.1					101 ± 2.7	0.18
Long-chain-fatty-acid--CoA ligase 1	Acsl1	P18163	M	1	10.4 ± 5.2					23.8 ± 1.7	0.068
Low-density lipoprotein receptor-related protein 2	Lrp2	P98158	AM	1	151.33 ± 7.7	119.33 ± 5	0.035	109.00 ± 5	0.083	125.33 ± 4	0.165
Low-density lipoprotein receptor-related protein 2	Lrp2	P98158	M	1	639.2 ± 130.9					455.8 ± 40.8	0.25
Low-density lipoprotein receptor-related protein 2	Lrp2	P98158	C		12.3 ± 1.7	4.3 ± 2.4	0.008			3.3 ± 1.7	0.01
LRRGT00043	Nme4	Q6TXF6	M		4.2 ± 1					7.5 ± 2	0.2
L-xylulose reductase	Dcxr	Q920P0	M		3.4 ± 1.3					1.8 ± 0.5	0.3
L-xylulose reductase	Dcxr	Q920P0	C		1.3 ± 1.3	2.3 ± 2.3	0.704			1.0 ± 0.6	0.943
Lysine-specific demethylase 3A	Kdm3a	Q63679	M		8.9 ± 2					5.7 ± 0.6	0.19
Lysosome-associated membrane glycoprotein 1	Lamp1	P14562	M	1	3.9 ± 2.3					2.1 ± 0.4	0.49
Lysosome-associated membrane glycoprotein 1	Lamp1	P14562	AM	1	5.67 ± 1.2	2.67 ± 0.7	0.035	3.33 ± 0.9	0.336	7.67 ± 0.7	0.368
Lysosome-associated membrane glycoprotein 2	Lamp2	P17046	AM	1	6.67 ± 1.8	1.33 ± 0.3	0.103	4.67 ± 2.0	0.368	8.33 ± 0.3	0.498
Lysozyme C-1	Lyz1	P00697	M		74.8 ± 24.9					71.9 ± 28.6	0.94
Lysozyme C-1	Lyz1	P00697	AM	0	3.33 ± 0.9	1.00 ± 0.0	0.118	1.00 ± 0.0	0.118	4.33 ± 0.7	0.58
Lysyl-tRNA synthetase	Kars	D4ABR8	C		1.0 ± 1.0	1.7 ± 1.7	0.931			0.7 ± 0.7	0.82
MACRO domain-containing protein 1 (Fragment)	Macrod1	Q8K4G6	M		3.8 ± 1.4					5.1 ± 1.6	0.58
Macrophage migration inhibitory factor	Mif	P30904	M		3.6 ± 2.2					2.7 ± 0.5	0.7
Macrophage migration inhibitory factor	Mif	P30904	AM	0	11.67 ± 0.3	5.33 ± 2.6	0.136	2.33 ± 0.9	0.005	5.67 ± 2.2	0.102
Major urinary protein	NA	P02761	AM	0	33.33 ± 13.2	1.00 ± 0.0	0.134	1.00 ± 0.0	0.134	1.00 ± 0.0	0.134
Major urinary protein	N/A	P02761	C		328.0 ± 152.5	99.7 ± 27.9	0.185			249.7 ± 136.9	0.889
Major vault protein	Mvp	Q62667	M		0.8 ± 0.8					0.4 ± 0.4	0.61
Malate dehydrogenase, cytoplasmic	Mdh1	O88989	M		37.8 ± 19					26.5 ± 6.3	0.6
Malate dehydrogenase, cytoplasmic	Mdh1	O88989	AM	0	12.33 ± 1.5	1.00 ± 0.0	0.016	1.00 ± 0.0	0.016	1.00 ± 0.0	0.016
Malate dehydrogenase, cytoplasmic	Mdh1	O88989	C		159.3 ± 63.8	225.7 ± 60.7	0.388			147.7 ± 29.6	0.777
Malate dehydrogenase, mitochondrial	Mdh2	P04636	M		158.5 ± 32.9					215.6 ± 19.2	0.21
Malate dehydrogenase, mitochondrial	Mdh2	P04636	C		16.0 ± 3.0	34.7 ± 6.1	0.206			18.0 ± 11.5	0.754
Maleylacetoacetate isomerase	Gstz1	P57113	M		28.5 ± 10.5					27.3 ± 1.3	0.92
Mannosyl-oligosaccharide glucosidase	Mogs	O88941	M	1	4.5 ± 2.4					4.2 ± 1.2	0.92
Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	Acadm	P08503	M		60.4 ± 4.5					54.3 ± 6.3	0.47
Medium-chain specific acyl-CoA dehydrogenase, mitochondrial	Acadm	P08503	C		2.0 ± 1.5	4.7 ± 3.3	0.376			0.0 ± 0.0	0.47
Membrane-associated progesterone receptor component 1	Pgrmc1	P70580	M	1	23.1 ± 4.5					29.6 ± 5.6	0.41
Membrane-bound aminopeptidase P	Xpnpep2	Q99MA2	AM	0	48.67 ± 2.7	26.00 ± 3.	0.054	37.00 ± 5.	0.252	45.67 ± 4.	0.644
Membrane-bound aminopeptidase P	Xpnpep2	Q99MA2	M		29.6 ± 6.2					22.6 ± 1.2	0.33
Membrane-bound carbonic anhydrase 12	Car12	A2IBE2	AM	1	8.00 ± 1.2	4.67 ± 2.3	0.109	3.33 ± 1.5	0.166	1.67 ± 0.3	0.034
Membrane-bound carbonic anhydrase 12	Car12	A2IBE2	M	1	58.7 ± 10.5					36 ± 2.8	0.1
Membrane-bound carbonic anhydrase 14	Car1	A2IBE0	AM	1	5.67 ± 1.2	1.00 ± 0.0	0.06	1.00 ± 0.0	0.06	4.00 ± 1.2	0.549
Metaxin 2	Mtx2	Q5U1Z9	M		13.6 ± 4.6					8 ± 1.5	0.3
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial	Mccc2	Q5XIT9	M		64.4 ± 14.4					58.3 ± 11.3	0.76
Methylmalonyl CoA epimerase (Predicted), isoform CRA_d	Mcee	D4A197	M		17.1 ± 6.7					20 ± 1.4	0.7
Mitochondrial antiviral-signaling protein	Mavs	Q66HG9	M		2.1 ± 1.5					2.1 ± 1.3	0.96
Mitochondrial carnitine/acylcarnitine carrier protein	Slc25a20	P97521	M	3	5.9 ± 3.2					5.7 ± 1.2	0.97
Mitochondrial carrier homolog 2 (C. elegans)	Mtch2	B0BN52	M		21 ± 6.7					24.2 ± 6.5	0.75
Mitochondrial dicarboxylate carrier	Slc25a10	O89035	M		57.8 ± 15.1					66.6 ± 8.5	0.64
Mitochondrial dicarboxylate carrier	Slc25a10	O89035	AM	0	1.00 ± 0.0	4.67 ± 2.3	0.257	4.67 ± 0.7	0.032	2.67 ± 1.7	0.423
Mitochondrial import inner membrane translocase subunit Tim10	Timm10	P62074	M		0.4 ± 0.4					0.7 ± 0.7	0.74
Mitochondrial import inner membrane translocase subunit Tim13	Timm13	P62076	M		4.2 ± 0.8					5 ± 1.9	0.7
Mitochondrial import inner membrane translocase subunit Tim8 A	Timm8a	Q9WVA1	M		4.5 ± 1.7					4.7 ± 2	0.93
Mitochondrial import inner membrane translocase subunit Tim9	Timm9	Q9WV97	M		4.9 ± 1.8					7.3 ± 2.4	0.46
Mitochondrial import receptor subunit TOM20 homolog	Tomm20	Q62760	M	1	4.5 ± 1.6					3.3 ± 2.2	0.67
Mitochondrial import receptor subunit TOM40 homolog	Tomm40	Q75Q40	M		12.1 ± 4.1					8.6 ± 0.9	0.45
Mitochondrial inner membrane protein	Immt	D3ZSD1	AM	0	1.00 ± 0.0	1.33 ± 0.3	0.423	1.33 ± 0.3	0.423	1.00 ± 0.0	1
Mitochondrial peptide methionine sulfoxide reductase	Msra	Q923M1	M		24.9 ± 3.3					25.6 ± 4.9	0.91
Mitochondrial peptide methionine sulfoxide reductase	Msra	Q923M1	C		1.0 ± 1.0	0.3 ± 0.3	0.455			0.0 ± 0.0	0.287
Mitochondrial Rho GTPase	Rnf135	A1L1L6	M	1	0.8 ± 0.4					1.5 ± 0.7	0.34
Mitochondrial ribosomal protein L20	Mrpl20	B2GV62	M		0.4 ± 0.4					1.3 ± 0.8	0.4
Mitochondrial ribosomal protein L45 (Predicted)	Mrpl45	D4A104	M		1.1 ± 1.1					1.8 ± 1	0.64
Mitochondrial ribosomal protein L50 (Predicted)	Mrpl50	D3ZYL4	M		1.5 ± 1.5					1.3 ± 0.7	0.89
Mitochondrial ribosomal protein L53	Mrpl53	B2RYW4	M		3.7 ± 1.9					0.7 ± 0.4	0.18
Mitochondrial ribosomal protein S27 (Predicted), isoform CRA_b	Mrps27	D4A3E8	M		0.8 ± 0.4					1.9 ± 0.6	0.19
Mitochondrial ribosomal protein S35 (Predicted)	Mrps35	D4A9Z6	M		2.2 ± 2.2					0.7 ± 0.7	0.53
Mitochondrial-processing peptidase subunit beta	Pmpcb	Q03346	M		9.3 ± 3.5					9 ± 2.2	0.95
Mitofusin-1	Mfn1	Q8R4Z9	M		0.4 ± 0.4					1.3 ± 0.8	0.39
Mitofusin-2	Mfn2	Q8R500	M	1	4.1 ± 2.1					2.2 ± 0.7	0.42
Mitogen activated protein kinase kinase 7, isoform CRA_b	Map2k7	D3ZX58	C		1.0 ± 1.0	0.0 ± 0.0	0.267			0.0 ± 0.0	0.267
Mitogen-activated protein kinase scaffold protein 1	Lamtor3	Q5U204	AM	0	4.67 ± 1.7	1.67 ± 0.3	0.189	1.67 ± 0.3	0.272	5.33 ± 0.7	0.691
Moesin	Msn	O35763	AM	0	16.67 ± 5.2	14.67 ± 1.	0.792	18.00 ± 1.	0.827	9.67 ± 2.7	0.443
Monocarboxylate transporter 1	Slc16a1	P53987	AM	11	1.33 ± 0.3	1.33 ± 0.3	1	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423
Monoglyceride lipase	Mgll	Q8R431	M		3.7 ± 2					9.4 ± 2.5	0.15
MOSC domain-containing protein 2, mitochondrial	Mosc2	O88994	M	1	24.1 ± 8.5					17.8 ± 6.5	0.58
Mtch1 protein	Mtch1	B0BN30	M	2	3.4 ± 2					4.2 ± 0.7	0.7
Mu-crystallin homolog	Crym	Q9QYU4	AM	0	1.67 ± 0.3	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184
Myb-binding protein 1A	Mybbp1a	O35821	C		0.7 ± 0.7	0.7 ± 0.7	0.952			0.3 ± 0.3	0.735
Myl6 protein	Myl6	B2GV99	AM	0	4.33 ± 0.3	3.00 ± 1.0	0.383	3.33 ± 0.9	0.478	5.67 ± 1.2	0.456
Myogenin	Myog	P20428	AM	0	1.00 ± 0.0	2.00 ± 1.0	0.423	1.67 ± 0.3	0.184	1.00 ± 0.0	1
Myosin light polypeptide 6	Myl6	Q64119	M		57 ± 15.5					56.3 ± 8.2	0.97
Myosin regulatory light chain 12B	Myl12b	P18666	M		10.5 ± 8.4					4.8 ± 1.7	0.54
Myosin regulatory light chain 12B	Myl12b	P18666	C		0.3 ± 0.3	3.3 ± 1.9	0.223			2.0 ± 1.5	0.426
Myosin, heavy polypeptide 9, non-muscle	Myh9	G3V6P7	M		180.4 ± 22.2					127.7 ± 8.4	0.09
Myosin, heavy polypeptide 9, non-muscle	Myh9	G3V6P7	C		4.3 ± 2.8	5.0 ± 0.6	0.747			5.3 ± 0.3	0.882
Myosin-9	Myh9	D4A1H1	AM	0	1.33 ± 0.3	1.33 ± 0.3	1	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423
Myosin-9	Myh9	Q62812	AM	0	1.67 ± 0.3	10.33 ± 0.	0.01	7.67 ± 1.8	0.102	12.67 ± 5.	0.156
Myosin-Ic	Myo1c	Q63355	M		0.8 ± 0.8					0.4 ± 0.4	0.61
N(G),N(G)-dimethylarginine dimethylaminohydrolase 1	Ddah1	O08557	M		20.1 ± 10.8					3.1 ± 1.4	0.19
N(G),N(G)-dimethylarginine dimethylaminohydrolase 1	Ddah1	O08557	C		10.3 ± 5.9	8.7 ± 5.4	0.688			5.7 ± 2.9	0.599
Na(+)/H(+) exchange regulatory cofactor 1	Slc9a3r1	Q9JJ19	AM	0	9.00 ± 3.1	5.67 ± 1.2	0.469	9.00 ± 1.5	1	14.33 ± 5.	0.287
Na(+)/H(+) exchange regulatory cofactor NHE-RF1	Slc9a3r1	Q9JJ19	M		51.5 ± 13.2					48.6 ± 3.4	0.84
Na(+)/H(+) exchange regulatory cofactor NHE-RF1	Slc9a3r1	Q9JJ19	C		10.7 ± 5.2	9.3 ± 4.4	0.662			8.7 ± 0.9	0.954
Na(+)/H(+) exchange regulatory cofactor NHE-RF3	Pdzk1	Q9JJ40	M		200.3 ± 55					165.8 ± 22.3	0.59
Na(+)/H(+) exchange regulatory cofactor NHE-RF3	Pdzk1	Q9JJ40	AM	0	49.00 ± 15.2	31.67 ± 11	0.533	48.33 ± 6.	0.951	34.33 ± 9.	0.215
Na(+)/H(+) exchange regulatory cofactor NHE-RF3	Pdzk1	Q9JJ40	C		46.7 ± 15.8	50.7 ± 20.3	0.883			17.3 ± 7.2	0.124
N-acetylgalactosamine kinase	Galk2	Q5XIG6	C		0.0 ± 0.0	2.7 ± 1.5	0.065			0.3 ± 0.3	0.685
N-acetyltransferase 8	Nat8	Q9QXT3	M	2	8.6 ± 3.4					6.3 ± 2	0.58
NADH dehydrogenase	Ndufs3	D3ZG43	AM	0	1.00 ± 0.0	17.33 ± 2.	0.027	18.67 ± 3.	0.031	7.67 ± 2.7	0.13
NADH dehydrogenase	Ndufs8	B0BNE6	AM	0	1.00 ± 0.0	5.00 ± 2.3	0.225	1.00 ± 0.0	1	5.33 ± 2.2	0.186
NADH dehydrogenase	Ndufv1	Q5XIH3	AM	0	1.00 ± 0.0	1.67 ± 0.3	0.184	1.33 ± 0.3	0.423	1.00 ± 0.0	1
NADH dehydrogenase	Ndufb5	D4A565	AM	1	1.00 ± 0.0	1.33 ± 0.3	0.423	1.00 ± 0.0	1	1.67 ± 0.7	0.423
NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex, 8	Ndufa8	D4A311	M		42 ± 10.4					49.2 ± 4.4	0.56
NADH dehydrogenase (Ubiquinone) 1 beta subcomplex 8	Ndufb8	B2RYS8	M		23.6 ± 5.6					17.5 ± 5.4	0.47
NADH dehydrogenase (Ubiquinone) 1 beta subcomplex, 11 (Predicted)	Ndufb11	D4A7L4	M	1	18.1 ± 2.9					14 ± 1.6	0.27
NADH dehydrogenase (Ubiquinone) 1 beta subcomplex, 5 (Predicted), isoform CRA_b	Ndufb5	D4A565	M	1	29.5 ± 8.1					22.1 ± 1.7	0.42
NADH dehydrogenase (Ubiquinone) 1 beta subcomplex, 6 (Predicted)	Ndufb6	D3ZZ21	M	1	21.7 ± 2.1					18.4 ± 2.6	0.38
NADH dehydrogenase (Ubiquinone) 1 beta subcomplex, 7 (Predicted)	Ndufb7	D3ZLT1	M		33.6 ± 5.8					23.4 ± 5.7	0.27
NADH dehydrogenase (Ubiquinone) 1 beta subcomplex, 9	Ndufb9	B2RYW3	M		26.4 ± 5.4					20.9 ± 2.5	0.4
NADH dehydrogenase (Ubiquinone) Fe-S protein 3 (Predicted), isoform CRA_c	Ndufs3	D3ZG43	M		98.2 ± 10.9					109.9 ± 5.5	0.39
NADH dehydrogenase (Ubiquinone) Fe-S protein 5	LOC100361505	B5DEL8	M		33 ± 5					34.4 ± 4.4	0.85
NADH dehydrogenase (Ubiquinone) Fe-S protein 7	Ndufs7	Q5RJN0	M		41.4 ± 11.5					50.6 ± 2.8	0.47
NADH dehydrogenase (Ubiquinone) Fe-S protein 8 (Predicted), isoform CRA_a	Ndufs8	B0BNE6	M		29.5 ± 6.1					25 ± 0.6	0.5
NADH dehydrogenase (Ubiquinone) flavoprotein 1	Ndufv1	Q5XIH3	M		69.5 ± 4.9					65.8 ± 3.2	0.56
NADH dehydrogenase (Ubiquinone) flavoprotein 3-like, isoform CRA_a	Ndufv3	G3V644	M		21.7 ± 5					23.3 ± 3.2	0.8
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4	Ndufaf4	Q9NQR8	M		3.7 ± 2.5					5.1 ± 1.9	0.67
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	Ndufa10	Q561S0	M		45.3 ± 17.3					52.7 ± 1.9	0.69
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11	Ndufa11	Q80W89	M	2	24.4 ± 5.1					24.4 ± 6.5	0.99
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2	Ndufa2	D3ZS58	M		21.6 ± 2.8					24 ± 3.9	0.64
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	Ndufa5	Q63362	M		43.1 ± 8.7					36.7 ± 6	0.58
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6	Ndufa6	D4A3V2	M		5.6 ± 4.1					13.4 ± 2.2	0.17
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial	Ndufa9	Q5BK63	M		71.6 ± 16.7					84.7 ± 14.8	0.59
NADH dehydrogenase [ubiquinone] 1 subunit C2	Ndufc2	Q5PQZ9	M	1	33.2 ± 6.8					31.8 ± 1.8	0.85
NADH dehydrogenase [ubiquinone] flavoprotein 2	Ndufv2	P19234	AM	0	1.00 ± 0.0	5.33 ± 0.7	0.023	1.67 ± 0.7	0.423	2.00 ± 0.6	0.225
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial	Ndufv2	P19234	M		30.9 ± 4.7					27.6 ± 1.9	0.55
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial	Ndufs2	Q641Y2	M		75.3 ± 10.4					50 ± 2.8	0.077
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial	Ndufs4	Q5XIF3	M		69.6 ± 9					60.5 ± 3.6	0.4
NADH dehydrogenase 1 alpha subunit 1	Ndufa10	Q561S0	AM	0	1.00 ± 0.0	1.33 ± 0.3	0.423	1.00 ± 0.0	1	1.00 ± 0.0	1
NADH_DH_b-subcmplx_su6	Ndufb6	D3ZDC3	AM	0	1.00 ± 0.0	2.67 ± 0.9	0.199	1.33 ± 0.3	0.423	1.00 ± 0.0	1
NADH_UbQ_OxRdtase-like	Ndufs7	D4ADX5	AM	0	1.00 ± 0.0	2.67 ± 0.9	0.199	2.33 ± 0.9	0.27	1.33 ± 0.3	0.423
NADH-cytochrome b5 reductase 3	Cyb5r3	P20070	M		15.5 ± 2					25.7 ± 4.1	0.088
NADH-ubiquinone oxidoreductase 75 kDa subunit	Ndufs1	Q66HF1	AM	0	1.00 ± 0.0	13.67 ± 2.	0.034	12.00 ± 2.	0.034	7.67 ± 5.7	0.362
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial	Ndufs1	Q66HF1	M		112.9 ± 10.9					108.7 ± 11.9	0.81
NADH-ubiquinone oxidoreductase chain 4	Mtnd4	P05508	M	13	13 ± 4.6					10.6 ± 4.2	0.71
NADH-ubiquinone oxidoreductase chain 5	Mt-nd5	Q8SEZ0	M	15	12.2 ± 6.4					16.9 ± 1.6	0.51
NADPH--cytochrome P450 reductase	Por	P00388	M	1	13.3 ± 1.4					21.7 ± 2.6	0.044
Napsin	Napsa	Q9QX71	M		34.8 ± 8					35.2 ± 6.8	0.97
Napsin	Napsa	Q9QX71	AM	0	9.67 ± 0.9	14.00 ± 1.	0.039	19.33 ± 3.	0.111	19.67 ± 2.	0.074
Napsin	Napsa	Q9QX71	C		6.3 ± 2.3	7.7 ± 2.6	0.92			5.3 ± 2.7	0.948
Ndufa4 protein	Ndufa4	B2RZD6	M	1	13 ± 3.2					11.6 ± 7.1	0.86
Ndufa4 protein	Ndufa4	B2RZD6	AM	1	1.00 ± 0.0	14.33 ± 5.	0.123	6.00 ± 3.2	0.26	10.00 ± 5.	0.231
Ndufa7 protein	Ndufa7	A9UMV9	M		12.4 ± 3.8					20.3 ± 3.9	0.21
Ndufa9 protein		B5DER7	AM	0	1.00 ± 0.0	17.67 ± 1.	0.01	16.67 ± 0.	0.001	6.00 ± 2.5	0.185
Neprilysin	Mme	P07861	AM	1	5.00 ± 4.0	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423	3.67 ± 2.2	0.823
Neutral and basic amino acid transport protein rBAT	Slc3a1	Q64319	M	1	73.3 ± 20.2					38.1 ± 10.8	0.2
Neutral and basic amino acid transporter rBAT	Slc3a1	Q64319	AM	1	29.67 ± 6.2	11.33 ± 3.	0.191	12.67 ± 5.	0.202	25.33 ± 3.	0.704
Nicalin	Ncln	Q5XIA1	M	2	1.2 ± 0.7					2.5 ± 2.1	0.57
Nicotinamide nucleotide transhydrogenase	Nnt	Q5BJZ3	AM	12	1.00 ± 0.0	3.67 ± 0.9	0.094	2.67 ± 0.9	0.199	1.33 ± 0.3	0.423
Nicotinamide nucleotide transhydrogenase	Nnt	Q5BJZ3	M	12	101.5 ± 32.1					104.8 ± 9.9	0.93
Nicotinate phosphoribosyltransferase domain containing 1, isoform CRA_c	Naprt1	G3V709	C		17.0 ± 7.8	26.3 ± 8.2	0.457			7.3 ± 4.3	0.365
Nit1 protein	Nit1	Q5PQK6	M		13.1 ± 2.1					12.7 ± 2.3	0.91
NLR family member X1	Nlrx1	Q5FVQ8	M		2.3 ± 1.2					1.2 ± 0.6	0.46
Non-erythroid spectrin beta		Q6XD99	AM	0	1.33 ± 0.3	5.00 ± 0.6	0.008	3.67 ± 1.5	0.25	11.67 ± 5.	0.204
Non-specific lipid-transfer protein	Scp2	P11915	M		10.8 ± 4.4					9.2 ± 0.6	0.74
Nucleobindin-1	Nucb1	Q63083	M		14.5 ± 5.3					23.1 ± 8.3	0.42
Nucleolin	Ncl	P13383	C		0.7 ± 0.7	3.0 ± 0.6	0.572			6.7 ± 4.1	0.109
Nucleoside diphosphate kinase B	Nme2	P19804	M		17.2 ± 7.5					8.6 ± 0.9	0.32
Nucleoside diphosphate kinase B	Nme2	P19804	AM	0	15.33 ± 2.3	1.00 ± 0.0	0.026	1.00 ± 0.0	0.026	1.00 ± 0.0	0.026
Nucleoside diphosphate kinase B	Nme2	P19804	C		38.3 ± 19.0	51.0 ± 26.1	0.698			28.3 ± 3.5	0.894
Obp3 protein	Obp3	Q78E14	M		19.2 ± 19.2					18.4 ± 18.4	0.98
OCIA domain-containing protein 1	Ociad1	Q5XIG4	M		8.6 ± 3.9					14 ± 1.5	0.26
Omega-amidase NIT2	Nit2	Q497B0	M		49.2 ± 8.7					37.6 ± 3.6	0.29
Omega-amidase NIT2	Nit2	Q497B0	C		40.0 ± 23.9	21.3 ± 11.1	0.285			9.0 ± 2.1	0.146
Ornithine aminotransferase, mitochondrial	Oat	P04182	M		74.5 ± 10.6					78 ± 6.3	0.79
Ornithine aminotransferase, mitochondrial	Oat	P04182	C		0.7 ± 0.7	1.0 ± 1.0	0.993			0.0 ± 0.0	0.422
Oxoglutarate dehydrogenase-like (Predicted), isoform CRA_a	Ogdhl	D3ZQD3	M		11.4 ± 5.9					6 ± 6	0.56
Oxysterol-binding protein (Fragment)	Osbpl8	F1M0B9	M	1	2.7 ± 0.4					5.5 ± 2	0.24
p55 protein	LOC652956	Q5BK33	AM	0	9.00 ± 0.6	6.33 ± 1.5	0.287	8.00 ± 1.2	0.58	13.67 ± 3.	0.349
Palmitoyl-protein thioesterase 1	Ppt1	P45479	M		3.3 ± 2.7					0.9 ± 0.6	0.44
Paraplegin	Spg7	Q7TT47	M	2	3.4 ± 2					2.1 ± 0.4	0.57
Park7 protein		Q5BKC3	AM	0	2.33 ± 0.3	1.00 ± 0.0	0.057	1.00 ± 0.0	0.057	1.00 ± 0.0	0.057
PDZK1-interacting protein 1	Pdzk1ip1	Q923S2	M	1	18.7 ± 6.7					14.9 ± 1.4	0.6
PDZK1-interacting protein 1	Pdzk1ip1	Q923S2	AM	1	4.67 ± 3.2	6.00 ± 2.9	0.839	13.67 ± 1.	0.156	9.00 ± 2.6	0.526
Peptidase (Mitochondrial processing) alpha	Pmpca	Q68FX8	M		18.8 ± 9.3					19.6 ± 4.2	0.94
Peptidyl-prolyl cis-trans isomerase A	Ppia	P10111	M		41 ± 20.6					27.3 ± 7.1	0.56
Peptidyl-prolyl cis-trans isomerase A	Ppia	P10111	AM	0	6.33 ± 2.4	1.00 ± 0.0	0.157	1.00 ± 0.0	0.157	1.00 ± 0.0	0.157
Peptidyl-prolyl cis-trans isomerase A	Ppia	P10111	C		49.3 ± 28.8	33.7 ± 18.6	0.472			20.0 ± 6.7	0.373
Peptidyl-prolyl cis-trans isomerase B	Ppib	P24368	M	1	14.3 ± 4					31.8 ± 5.7	0.066
Peptidyl-prolyl cis-trans isomerase F, mitochondrial	Ppif	P29117	M		3 ± 1.7					0.4 ± 0.4	0.18
Peroxiredoxin-1	Prdx1	Q63716	M		28.8 ± 11.8					30 ± 8.6	0.94
Peroxiredoxin-1	Prdx1	Q63716	AM	0	17.67 ± 0.9	1.33 ± 0.3	0.002	2.33 ± 0.3	0.002	13.33 ± 3.	0.339
Peroxiredoxin-1	Prdx1	Q63716	C		27.0 ± 1.0	21.3 ± 12.1	0.505			18.7 ± 2.0	0.541
Peroxiredoxin-2	Prdx2	P35704	M		1.2 ± 0.7					2.5 ± 2.1	0.57
Peroxiredoxin-2	Prdx2	P35704	AM	0	2.33 ± 0.3	1.00 ± 0.0	0.057	1.00 ± 0.0	0.057	1.00 ± 0.0	0.057
Peroxiredoxin-2	Prdx2	P35704	C		7.0 ± 2.1	3.3 ± 3.3	0.146			4.3 ± 0.9	0.449
Peroxiredoxin-6	Prdx6	O35244	M		21.2 ± 5.2					13.2 ± 1.8	0.22
Peroxiredoxin-6	Prdx6	O35244	C		12.0 ± 9.6	8.3 ± 5.3	0.642			0.3 ± 0.3	0.183
Peroxisomal 2,4-dienoyl-CoA reductase	Decr2	Q9Z2M4	C		5.0 ± 2.1	3.0 ± 3.0	0.512			13.7 ± 5.6	0.164
Peroxisomal acyl-coenzyme A oxidase 1	Acox1	P07872	M		26.3 ± 6.9					51.5 ± 0.5	0.021
Peroxisomal acyl-coenzyme A oxidase 1	Acox1	P07872	C		21.7 ± 0.9	30.7 ± 5.2	0.45			24.3 ± 4.9	0.412
Peroxisomal bifunctional enzyme	Ehhadh	P07896	M		14.4 ± 3.6					31.5 ± 2.1	0.014
Peroxisomal bifunctional enzyme	Ehhadh	P07896	C		6.7 ± 4.2	3.0 ± 0.6	0.302			3.0 ± 1.5	0.358
Peroxisomal multifunctional enzyme type 2	Hsd17b4	P97852	M		48.1 ± 3.7					95.4 ± 5.4	0.002
Peroxisomal multifunctional enzyme type 2	Hsd17b4	P97852	AM	0	1.00 ± 0.0	1.33 ± 0.3	0.423	1.00 ± 0.0	1	1.33 ± 0.3	0.423
Peroxisomal multifunctional enzyme type 2	Hsd17b4	P97852	C		22.0 ± 10.6	7.3 ± 0.3	0.474			38.0 ± 22.2	0.464
Peroxisomal trans-2-enoyl-CoA reductase	Pecr	Q9WVK3	M		21.1 ± 3.6					25.3 ± 5.7	0.56
Peroxisome assembly factor 2	Pex6	P54777	M		0.8 ± 0.8					0.7 ± 0.7	0.89
Phenazine biosynthesis-like domain-containing protein	Pbld	Q68G31	M		2.4 ± 0.8					1.6 ± 0.9	0.51
Phenazine biosynthesis-like domain-containing protein	Pbld	Q68G31	C		3.7 ± 2.2	1.3 ± 0.9	0.329			5.0 ± 2.0	0.559
Phenylalanine-4-hydroxylase	Pah	P04176	M		19.8 ± 10.6					7.3 ± 3.5	0.32
Phenylalanine-4-hydroxylase	Pah	P04176	C		22.0 ± 2.9	11.7 ± 3.0	0.012			15.7 ± 2.0	0.235
Phenylalanyl-tRNA synthetase, beta subunit	Farsb	Q68FT7	C		0.0 ± 0.0	0.0 ± 0.0	1			0.7 ± 0.7	0.267
Phosphatidylethanolamine-binding protein 1	Pebp1	P31044	M		24.2 ± 11					14.1 ± 2.7	0.42
Phosphatidylethanolamine-binding protein 1	Pebp1	P31044	C		49.3 ± 35.5	10.7 ± 10.7	0.185			24.0 ± 9.0	0.514
Phosphatidylinositide phosphatase SAC1	Sacm1l	Q9ES21	M	2	6.7 ± 2.3					7.2 ± 1.3	0.85
Phosphoenolpyruvate carboxykinase, cytosolic	Pck1	P07379	AM	0	6.67 ± 3.0	1.00 ± 0.0	0.196	1.00 ± 0.0	0.196	4.00 ± 1.2	0.524
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]	Pck1	P07379	M		15 ± 8.2					33.9 ± 2.8	0.094
Phosphoenolpyruvate carboxykinase, cytosolic [GTP]	Pck1	P07379	C		107.3 ± 23.1	644.3 ± 13.6	0.001			344.3 ± 55.8	0.012
Phosphoglucomutase-1	Pgm1	P38652	M		5.1 ± 2					2.8 ± 1.5	0.4
Phosphoglucomutase-1	Pgm1	P38652	C		1.7 ± 1.2	3.7 ± 2.7	0.433			0.0 ± 0.0	0.558
Phosphoglycerate kinase 1	Pgk1	P16617	M		28.7 ± 12.7					15.2 ± 5.9	0.39
Phosphoglycerate kinase 1	Pgk1	P16617	C		87.0 ± 55.1	69.0 ± 36.8	0.639			44.3 ± 14.8	0.556
Phosphoglycerate mutase 1	Pgam1	P25113	M		15.1 ± 4.9					6.1 ± 3.3	0.2
Phosphoglycerate mutase 1	Pgam1	P25113	AM	0	3.67 ± 0.9	1.00 ± 0.0	0.094	1.00 ± 0.0	0.094	1.00 ± 0.0	0.094
Phosphoglycerate mutase 1	Pgam1	P25113	C		20.3 ± 9.8	16.0 ± 6.0	0.418			10.3 ± 1.3	0.311
Phospholipase A-2-activating protein	Plaa	P54319	C		0.3 ± 0.3	0.7 ± 0.7	0.821			1.0 ± 1.0	0.442
Phosphoserine aminotransferase	Psat1	D3ZHJ1	M		1.2 ± 0.1					1.8 ± 1	0.51
Phosphoserine aminotransferase	Psat1	E9PSV5	C		12.0 ± 8.6	9.7 ± 2.4	0.809			5.7 ± 1.8	0.529
Phosphoserine phosphatase	Psph	Q5M819	C		9.0 ± 5.1	1.0 ± 0.6	0.135			1.0 ± 0.6	0.134
Phosphotriesterase-related protein	Pter	Q63530	M		5.8 ± 0.8					4.8 ± 0.6	0.35
Phosphotriesterase-related protein	Pter	Q63530	C		17.3 ± 12.9	8.3 ± 6.8	0.462			10.0 ± 4.7	0.801
Plasma glutamate carboxypeptidase	Pgcp	Q6IRK9	M		15.6 ± 4.6					11.6 ± 0.9	0.44
Plasma glutamate carboxypeptidase	Pgcp	P25113	C		6.7 ± 3.5	15.0 ± 5.3	0.289			11.3 ± 0.7	0.406
Plasma protease C1 inhibitor	Serping1	Q6P734	M		0.4 ± 0.4					1.9 ± 1	0.22
Plasmolipin	Pllp	P47987	M	4	0.8 ± 0.8					3.1 ± 1.2	0.16
Plexin B2	Plxnb2	D3ZQ57	M		2.3 ± 1.2					4.9 ± 1.2	0.18
Pls1 protein	ls1	B5DEY0	AM	0	3.67 ± 1.5	1.00 ± 0.0	0.208	1.00 ± 0.0	0.208	2.00 ± 0.6	0.464
Poly A binding protein, cytoplasmic 2 (Predicted)	Pabpc2	D4A233	C		3.0 ± 1.5	4.0 ± 0.6	0.767			2.7 ± 1.7	0.955
Polyadenylate-binding protein 1	Pabpc1	Q9EPH8	M		5.2 ± 2.9					1.9 ± 1.9	0.38
Polypyrimidine tract binding protein 1, isoform CRA_c	Ptbp1	D3ZB30	M		3.1 ± 0.3					2.2 ± 1.4	0.54
Polyribonucleotide nucleotidyltransferase 1	Pnpt1	G3V6G7	M		8.1 ± 5.7					8 ± 2.2	0.99
Potassium-transporting ATPase alpha chain 1	Atp4a	P09626	M	8	30.1 ± 7.7					28.6 ± 1.6	0.85
Potassium-transporting ATPase alpha chain 2	Atp12a	P54708	AM	8	1.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	1.33 ± 0.3	0.423
PRA1 family protein 3	Arl6ip5	Q9ES40	M	4	3.7 ± 2.6					3.6 ± 1.8	0.96
Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial	Dhtkd1	Q4KLP0	M		106 ± 29.8					109.8 ± 6.3	0.91
Probable N-acetyltransferase CML1	Cml1	Q9QXT4	M	1	2.3 ± 2.3					1.9 ± 1.9	0.89
Pro-cathepsin H	Ctsh	P00786	M		8.5 ± 2					3.9 ± 0.7	0.091
Prodh2 protein	Prodh2	B0BNG1	M		37.6 ± 13.2					26.5 ± 2.9	0.45
Profilin-1	Pfn1	P62963	M		6.3 ± 3.3					7.2 ± 2	0.82
Profilin-1	Pfn1	P62963	AM	0	1.33 ± 0.3	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423
Profilin-1	Pfn1	P62963	C		31.7 ± 13.5	16.0 ± 8.1	0.126			16.3 ± 4.8	0.252
Programmed cell death 6 (Predicted), isoform CRA_a	Pdcd6	G3V7W1	C		1.7 ± 0.9	1.0 ± 0.6	0.394			0.0 ± 0.0	0.107
Programmed cell death 6-interacting protein	Pdcd6ip	Q9QZA2	M		4.7 ± 1.8					1.2 ± 0.6	0.14
Programmed cell death 6-interacting protein	Pdcd6ip	Q9QZA2	AM	0	1.67 ± 0.3	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184
Programmed cell death 6-interacting protein	Pdcd6ip	Q9QZA2	C		5.0 ± 2.1	8.0 ± 3.5	0.685			3.7 ± 1.9	0.618
Prohibitin	Phb	P67779	M		84 ± 9.6					75.7 ± 4.3	0.47
Prohibitin-2	Phb2	Q5XIH7	M		95.8 ± 35.4					73.3 ± 6.4	0.56
Prohibitin-2	Phb2	Q5XIH7	AM	0	1.33 ± 0.3	6.33 ± 0.9	0.049	4.33 ± 0.9	0.035	2.33 ± 1.3	0.423
Proliferation-associated 2G4	Pa2g4	Q6AYD3	M		0.4 ± 0.4					1.3 ± 1.3	0.55
Proline synthetase co-transcribed (Predicted)	Prosc	D3ZCA0	M		33.6 ± 2.3					33 ± 3.2	0.88
Proline synthetase co-transcribed (Predicted)	Prosc	D3ZCA0	C		3.3 ± 3.3	3.3 ± 3.3	0.969			2.0 ± 1.5	0.913
Propionyl coenzyme A carboxylase, beta polypeptide	Pccb	Q68FZ8	M		65.1 ± 11.3					71.3 ± 5.3	0.64
Propionyl-CoA carboxylase alpha chain, mitochondrial	Pcca	P14882	M		23.1 ± 7.7					31.3 ± 5.3	0.42
Propionyl-CoA carboxylase beta chain, mitochondrial	Pccb	P07633	M		68.6 ± 11.9					66 ± 5.7	0.85
Prosaposin	Psap	Q6P7A4	AM	0	2.33 ± 0.3	1.00 ± 0.0	0.057	1.00 ± 0.0	0.057	2.00 ± 1.0	0.808
Prostaglandin E synthase 2 (Predicted), isoform CRA_b	Ptges2	D4AE56	M		10.1 ± 3.2					6.9 ± 1.4	0.42
Prostaglandin E synthase 3	Ptges3	P83868	C		1.0 ± 1.0	8.3 ± 0.9	0.005			1.3 ± 0.3	0.893
Prostaglandin reductase 2	Ptgr2	Q5BK81	M		3.8 ± 3.8					1.2 ± 0.6	0.54
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 3	Psmd3	Q5U2S7	C		0.3 ± 0.3	1.7 ± 0.9	0.2			1.0 ± 0.6	0.337
Proteasome activator complex subunit 1	Psme1	Q63797	M		0.8 ± 0.4					1 ± 0.6	0.86
Proteasome subunit alpha type	Psma5	Q6P9V6	C		4.7 ± 2.9	3.0 ± 1.7	0.485			4.3 ± 1.5	0.884
Proteasome subunit alpha type-1	Psma1	P18420	C		0.3 ± 0.3	1.3 ± 1.3	0.502			0.7 ± 0.7	0.67
Proteasome subunit alpha type-2	Psma2	P17220	M		5.9 ± 3.1					2.2 ± 0.7	0.29
Proteasome subunit alpha type-4	Psma4	P21670	C		1.3 ± 1.3	0.0 ± 0.0	0.277			0.7 ± 0.3	0.53
Proteasome subunit beta type-2	Psmb2	P40307	C		5.7 ± 2.3	2.3 ± 1.5	0.276			3.7 ± 2.7	0.607
Protein AMBP	Ambp	Q64240	M		2 ± 0.9					13.8 ± 3.3	0.024
Protein disulfide-isomerase	P4hb	P04785	M		60 ± 15.5					61.4 ± 3.9	0.24
Protein disulfide-isomerase A3	Pdia3	P11598	M		15.8 ± 3.1					14.4 ± 3.1	0.93
Protein disulfide-isomerase A3	Pdia3	P11598	C		1.3 ± 1.3	0.3 ± 0.3	0.367			0.3 ± 0.3	0.409
Protein disulfide-isomerase A6	Pdia6	Q63081	M		35.6 ± 8.3					49 ± 5.4	0.76
Protein DJ-1	Park7	O88767	M		9.6 ± 3.6					8.5 ± 2.5	0.8
Protein DJ-1	Park7	O88767	C		41.7 ± 20.2	34.3 ± 6.1	0.579			28.7 ± 9.8	0.652
Protein FAM151A	Fam151a	Q642A7	AM	1	28.33 ± 4.1	9.33 ± 3.8	0.129	17.00 ± 3.	0.031	20.00 ± 2.	0.303
Protein FAM151A	Fam151a	Q642A7	M	1	32.8 ± 6.4					11.7 ± 2.5	0.036
Protein FAM162A	Fam162a	Q4QQV3	M	1	0.4 ± 0.4					0.9 ± 0.6	0.45
Protein Mpv17	Mpv17	Q5BK62	M	2	0.4 ± 0.4					1.2 ± 0.4	0.15
Protein NDRG1	Ndrg1	Q6JE36	M		22.9 ± 4.3					26.2 ± 2.1	0.54
Protein NDRG1	Ndrg1	Q6JE36	AM	0	6.00 ± 1.5	9.67 ± 4.5	0.512	8.67 ± 5.4	0.716	23.67 ± 8.	0.197
Protein NDRG1	Ndrg1	Q6JE36	C		37.3 ± 12.3	65.0 ± 26.7	0.472			32.0 ± 5.5	0.834
Protein phosphatase 2	Ppp2r1a	Q5XI34	AM	0	1.33 ± 0.3	1.33 ± 0.3	1	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423
Protein phosphatase 2 (Formerly 2A), regulatory subunit A (PR 65), alpha isoform, isoform CRA_a	Ppp2r1a	Q5XI34	M		2.7 ± 2.1					2.2 ± 0.7	0.81
Protein phosphatase 2 (Formerly 2A), regulatory subunit A (PR 65), alpha isoform, isoform CRA_a	Ppp2r1a	Q5XI34	C		7.3 ± 2.3	9.7 ± 1.5	0.943			10.0 ± 2.6	0.505
Protein TBRG4	Tbrg4	Q5M9G9	M		1.1 ± 1.1					0.3 ± 0.3	0.52
Protein transport protein Sec61 subunit alpha isoform 1	Sec61a1	P61621	M	10	1.9 ± 1.3					2.1 ± 0.4	0.85
Protoporphyrinogen oxidase (Predicted)	Ppox	D3ZVN7	M		3 ± 2.4					2.2 ± 0.9	0.76
Purine nucleoside phosphorylase	Pnp	P85973	C		3.7 ± 1.5	3.7 ± 2.3	0.668			0.0 ± 0.0	0.082
Putative ATP-dependent RNA helicase DHX30	Dhx30	Q5BJS0	M		0.4 ± 0.4					0.9 ± 0.5	0.46
Putative uncharacterized protein Rbm12b	LOC679087	D3ZM54	AM	0	1.33 ± 0.3	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423
Putative uncharacterized protein RGD1307051_predicted	RGD1307051_predicted	D3ZDV3	M		81.7 ± 15.7					107 ± 11.3	0.26
Pyridine nucleotide-disulf. oxidoreductase Dom. Cont. 2	Pyroxd2	Q68FT3	AM	0	1.33 ± 0.3	7.67 ± 2.2	0.113	10.00 ± 1.	0.01	3.33 ± 1.5	0.368
Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2	Pyroxd2	Q68FT3	M		82.1 ± 20.9					107.6 ± 18.1	0.41
Pyridoxal kinase	Pdxk	O35331	M		11.1 ± 6.4					0.7 ± 0.7	0.18
Pyridoxine-5'-phosphate oxidase	Pnpo	O88794	C		1.0 ± 1.0	1.0 ± 1.0	0.968			0.3 ± 0.3	0.664
Pyruvate carboxylase, mitochondrial	Pc	P52873	M		514.5 ± 127.3					434.8 ± 41.7	0.58
Pyruvate carboxylase, mitochondrial	Pc	P52873	C		5.3 ± 2.3	8.0 ± 4.0	0.718			4.7 ± 2.2	0.984
Pyruvate dehydrogenase E1 component subunit beta, mitochondrial	Pdhb	P49432	M		119.1 ± 24.1					112.3 ± 8.8	0.8
Pyruvate dehydrogenase E1 subunit beta	Pdhb	P49432	AM	0	1.00 ± 0.0	1.33 ± 0.3	0.423	1.33 ± 0.3	0.423	1.00 ± 0.0	1
Pyruvate kinase isozymes M1/M2	Pkm2	P11980	C		5.0 ± 3.2	1.3 ± 1.3	0.233			0.7 ± 0.3	0.209
Quinone oxidoreductase	Cryz	Q6AYT0	M		22.5 ± 11.5					45 ± 24.3	0.45
Quinone oxidoreductase	Cryz	Q6AYT0	C		9.0 ± 4.5	5.3 ± 2.9	0.511			4.7 ± 0.9	0.499
Quinone oxidoreductase-like protein 2	NA	B0BNC9	M		33 ± 10.4					37.2 ± 2.3	0.71
Rab GDP dissociation inhibitor alpha	Gdi1	P50398	M		3.6 ± 1.8					2.2 ± 1.4	0.56
Rab GDP dissociation inhibitor alpha	Gdi1	P50398	C		17.7 ± 9.1	18.7 ± 1.9	0.996			15.0 ± 7.2	0.93
Rab GDP dissociation inhibitor beta	Gdi2	P50399	M		22.4 ± 6.4					12.6 ± 2.4	0.22
Rab GDP dissociation inhibitor beta	Gdi2	P50399	C		69.3 ± 13.8	80.3 ± 11.0	0.895			54.0 ± 5.0	0.523
RAB10, RAS oncogene family	Rab10	Q5RKJ9	AM	0	2.67 ± 0.7	3.00 ± 1.0	0.742	2.00 ± 1.0	0.691	5.33 ± 2.3	0.287
Radixin	Rdx	Q5PQK5	AM	0	8.33 ± 3.5	1.67 ± 0.7	0.245	2.33 ± 0.7	0.173	5.33 ± 4.3	0.732
Ragulator complex protein LAMTOR1	Lamtor1	Q6P791	M		1.2 ± 1.2					0.7 ± 0.7	0.71
Ras-related C3 botulinum toxin substrate 1	Rac1	Q6RUV5	M		3 ± 2					0.9 ± 0.6	0.37
Ras-related C3 botulinum toxin substrate 1, CRA_b	Rac1	D4ADX3	AM	0	1.67 ± 0.3	1.67 ± 0.7	1	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184
Ras-related protein Rab-11B	Rab11b	O35509	M		6.1 ± 4.3					3.4 ± 2.1	0.6
Ras-related protein Rab-14	Rab14	P61107	M		22.1 ± 0.3					20 ± 2	0.35
Ras-related protein Rab-1A	Rab1A	Q6NYB7	AM	0	8.00 ± 0.6	1.67 ± 0.3	0.003	9.33 ± 1.9	0.578	7.00 ± 1.7	0.58
Ras-related protein Rab-1B	Rab1b	P10536	AM	0	1.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	1.67 ± 0.7	0.423
Ras-related protein Rab-1B	Rab1b	P10536	M		5.5 ± 3.2					11.2 ± 2.8	0.25
Ras-related protein Rab-21	Rab21	Q6AXT5	M		1.6 ± 0.8					9.5 ± 1.6	0.011
Ras-related protein Rab-2A	Rab2a	P05712	M		4.4 ± 2.3					6.6 ± 1	0.42
Ras-related protein Rab-7a	Rab7a	P09527	M		10.2 ± 3.6					16.4 ± 1.9	0.19
Ras-related protein Rab-7a	Rab7a	P09527	AM	0	10.67 ± 0.9	3.00 ± 1.0	0.008	6.67 ± 1.3	0.195	15.33 ± 4.	0.349
Ras-related protein Rab-7a	Rab7a	P09527	C		2.0 ± 1.5	1.3 ± 1.3	0.734			2.7 ± 2.7	0.822
Ras-related protein Ral-B	Ralb	P36860	M		2.4 ± 1.2					1.3 ± 0.9	0.47
Ras-related protein Rap-1A	Rap1a	P62836	M		28.7 ± 8.4					27 ± 4.8	0.87
Ras-related protein Rap-1A	Rap1a	P62836	AM	0	10.00 ± 0.6	13.00 ± 2.	0.43	11.00 ± 2.	0.742	8.67 ± 1.9	0.456
RCG20221, isoform CRA_b	Copa	G3V6T1	C		9.0 ± 1.0	4.7 ± 1.7	0.526			10.0 ± 9.0	0.856
RCG20978, isoform CRA_e	RGD1563216	D4A4L5	M		5.6 ± 2.5					6.9 ± 0.7	0.64
RCG21481, isoform CRA_b	Golga3	D3ZLD5	C		0.3 ± 0.3	0.7 ± 0.7	0.741			0.0 ± 0.0	0.524
RCG24191	Sfxn1	Q6AYS2	AM	2	1.00 ± 0.0	9.00 ± 0.6	0.005	7.67 ± 1.5	0.044	3.67 ± 1.5	0.208
RCG25819, isoform CRA_a	Acaa1a	G3V9B9	C		13.7 ± 6.2	14.7 ± 5.9	0.797			9.7 ± 3.5	0.703
RCG29047, isoform CRA_b	Gstm1	G3V983	C		3.0 ± 0.0	3.3 ± 3.3	0.925			13.0 ± 7.0	0.15
RCG30479, isoform CRA_b	Rpl7	B0K031	C		6.7 ± 2.7	3.3 ± 2.8	0.199			0.7 ± 0.7	0.088
RCG32401, isoform CRA_a	Ctsa	D3ZPA9	M		11.5 ± 3.4					4.5 ± 0.5	0.1
RCG32401, isoform CRA_a	Ctsa	D3ZPA9	C		1.0 ± 0.0	10.0 ± 3.8	0.014			1.3 ± 0.9	0.855
RCG32615, isoform CRA_a	Rab5c	B0BNK1	M		9.4 ± 2.5					8.3 ± 2.4	0.77
RCG32615, isoform CRA_a	Rab5c	B0BNK1	AM	0	3.00 ± 1.2	1.00 ± 0.0	0.225	1.00 ± 0.0	0.225	4.33 ± 2.0	0.716
RCG32945	Ndufb10	D4A0T0	M		49.9 ± 6.1					49 ± 3.7	0.91
RCG32945	Ndufb10	D4A0T0	AM	0	1.00 ± 0.0	17.00 ± 2.	0.017	13.00 ± 3.	0.087	3.00 ± 1.5	0.321
RCG33185	Ccdc56	D3Z9I1	M	1	7.4 ± 2.9					8.1 ± 1.1	0.83
RCG34378, isoform CRA_h	LOC100359960	G3V957	C		4.3 ± 0.9	6.0 ± 0.6	0.733			8.0 ± 1.7	0.099
RCG34610, isoform CRA_c	Srsf1	D4A9L2	M		1.5 ± 1					0 ± 0	0.2
RCG34648	LOC100363222	D4ADG2	M		3.4 ± 2.4					5.7 ± 1	0.42
RCG35999, isoform CRA_a	Smtn	D4ABA5	M		0 ± 0					0.6 ± 0.6	0.37
RCG37494	Acss1	D3ZZN3	M		56.2 ± 12.1					35.3 ± 3.6	0.17
RCG38845, isoform CRA_b	rCG_38845	D3ZE15	M	1	31.6 ± 9.5					39.6 ± 6.6	0.52
RCG38845, isoform CRA_b	rCG_38845	D3ZE15	AM	1	1.00 ± 0.0	3.67 ± 1.5	0.208	1.33 ± 0.3	0.423	2.00 ± 1.0	0.423
RCG39036, isoform CRA_a	Cdh16	G3V7L4	M	1	16.2 ± 8.2					2.7 ± 0.6	0.18
RCG40097	Rras2	Q5BJU0	M		2.4 ± 0.8					1.3 ± 1.3	0.47
RCG40097	Rras2	Q5BJU0	AM	0	2.00 ± 0.6	2.33 ± 0.9	0.808	1.67 ± 0.7	0.423	1.67 ± 0.3	0.667
RCG41911	Mrps16	D4A7X1	M		6.5 ± 2.3					4.5 ± 0.8	0.44
RCG41951, isoform CRA_a	LOC679739	D3ZCZ9	M		15.2 ± 5.2					21.4 ± 1.3	0.31
RCG43751	LOC100361295	D3ZKG1	M		9 ± 2.4					13.8 ± 2.8	0.25
RCG44002, isoform CRA_a	Tmem14c	B0BNJ9	M	4	0.4 ± 0.4					1.9 ± 0.6	0.094
RCG45085	Tubb4	B4F7C2	AM	0	1.33 ± 0.3	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423	1.33 ± 0.3	1
RCG46430	Mgst3	D4ADS4	M	4	63.5 ± 6.2					51.9 ± 8.1	0.31
RCG46686, isoform CRA_a	Rps14	Q6PDV6	C		5.0 ± 3.1	4.0 ± 1.5	0.567			5.0 ± 2.0	0.889
RCG49810, isoform CRA_a	Magmas	D3ZZV1	M		4 ± 2.6					2.1 ± 0.4	0.49
RCG52629	Atp6v1a	D4A133	M		196.6 ± 25.1					165.4 ± 20.5	0.39
RCG52629	Atp6v1a	D4A133	AM	0	64.00 ± 3.6	54.33 ± 4.	0.258	54.00 ± 6.	0.289	41.33 ± 5.	0.136
RCG52629	Atp6v1a	D4A133	C		17.7 ± 6.7	21.3 ± 1.3	0.645			12.7 ± 5.4	0.678
RCG52860, isoform CRA_b	Hgd	G3V6C2	M		7 ± 2.5					1.6 ± 1.1	0.11
RCG52860, isoform CRA_b	Hgd	G3V6C2	C		6.3 ± 1.7	17.3 ± 7.0	0.081			8.0 ± 1.0	0.482
RCG55135, isoform CRA_b	Tln1	G3V852	M		3.4 ± 1.1					4.2 ± 0.9	0.57
RCG55135, isoform CRA_b	Tln1	G3V852	C		4.0 ± 3.5	3.7 ± 2.0	0.864			5.0 ± 2.6	0.754
RCG55602	Man2a1	G3V7Y9	M	1	3 ± 3					1.5 ± 0.3	0.64
RCG55994, isoform CRA_c	Cct7	D4AC23	C		2.0 ± 0.6	2.3 ± 1.5	0.759			0.3 ± 0.3	0.256
RCG57079, isoform CRA_a	LOC100361733	D4A4Q4	M		6.8 ± 2.5					4.2 ± 1.7	0.42
RCG57686	LOC100363253	D3ZMY7	M		6.6 ± 6					4.3 ± 1.3	0.72
RCG58071, isoform CRA_a	Rpl4	Q6P3V9	M		1.5 ± 1.5					0 ± 0	0.37
RCG58449, isoform CRA_a	Atp5l	G3V9A9	M		74.1 ± 7.2					59 ± 5.2	0.16
RCG60159	Uqcrb	B2RYS2	M		147.3 ± 27.6					135.4 ± 2.8	0.69
Regucalcin	Rgn	Q03336	C		0.0 ± 0.0	0.7 ± 0.7	0.755			1.7 ± 1.7	0.282
Regulator of microtubule dynamics protein 1	Fam82b	Q4G069	M		17 ± 3.9					9 ± 2.5	0.15
Retinal dehydrogenase 1	Aldh1a1	P51647	M		21.8 ± 7.2					5.1 ± 2.4	0.09
Retinal dehydrogenase 1	Aldh1a1	P51647	AM	0	3.33 ± 0.9	1.00 ± 0.0	0.118	1.00 ± 0.0	0.118	1.00 ± 0.0	0.118
Retinal dehydrogenase 1	Aldh1a1	P51647	C		62.0 ± 8.5	102.3 ± 14.8	0.241			61.7 ± 17.2	0.854
Retinoid-inducible serine carboxypeptidase	Scpep1	Q920A6	M	1	3.8 ± 1.3					6 ± 0.7	0.2
Retinoid-inducible serine carboxypeptidase	Scpep1	Q920A6	AM	1	5.33 ± 2.3	1.00 ± 0.0	0.204	1.00 ± 0.0	0.204	1.00 ± 0.0	0.204
Retinoid-inducible serine carboxypeptidase	Scpep1	Q920A6	C		26.7 ± 8.7	56.3 ± 12.1	0.011			15.3 ± 4.3	0.241
Retinol-binding protein 1	Rbp1	P02696	M		6.1 ± 5.6					4.2 ± 1.5	0.75
Retinol-binding protein 1	Rbp1	P02696	C		11.0 ± 5.7	2.7 ± 1.8	0.217			8.7 ± 4.1	0.987
Retinol-binding protein 4	Rbp4	P04916	M		15.6 ± 4.6					29.9 ± 3.5	0.065
Retinol-binding protein 4	Rbp4	P04916	AM	0	1.67 ± 0.3	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184	1.33 ± 0.3	0.423
Retinol-binding protein 4	Rbp4	P04916	C		3.7 ± 2.7	7.3 ± 2.0	0.613			12.7 ± 2.3	0.051
RGD1564894 protein	RGD1564894	B1H250	M		4.1 ± 3.1					3.6 ± 0.9	0.88
Rho GDP-dissociation inhibitor 1	Arhgdia	Q5XI73	C		7.3 ± 3.7	3.0 ± 1.5	0.265			2.7 ± 2.2	0.285
Ribonuclease 4	Rnase4	O55004	M	1	7.5 ± 1.5					17.7 ± 3.3	0.044
Ribonuclease UK114	Hrsp12	P52759	M		17.3 ± 2.7					14.8 ± 4	0.61
Ribonuclease UK114	P52759	P52759	AM	0	18.67 ± 2.8	1.00 ± 0.0	0.025	1.00 ± 0.0	0.025	1.33 ± 0.3	0.032
Ribonuclease UK114	Hrsp12	P52759	C		69.3 ± 29.3	40.7 ± 23.1	0.468			89.3 ± 36.2	0.423
Ribosomal protein L15	RGD1560501	D3ZU80	C		1.0 ± 0.6	0.3 ± 0.3	0.604			2.3 ± 1.5	0.38
Ribosomal protein L18	Rpl18	Q0QEW8	AM	0	1.00 ± 0.0	2.00 ± 0.0	1	1.00 ± 0.0	1	2.33 ± 0.9	0.27
Ribosomal protein S5, isoform CRA_b	Rps5	B0BN81	C		8.3 ± 4.2	8.0 ± 4.4	0.858			4.0 ± 4.0	0.654
Ribosomal protein, mitochondrial, L15	Mrpl19	D4A4A9	M		1.9 ± 1					1.8 ± 0.1	0.96
Ribosomal_S5_C	RGD1562399	D3ZAS1	AM	0	1.67 ± 0.3	2.33 ± 0.9	0.423	1.00 ± 0.0	0.184	2.00 ± 1.0	0.742
RNA-binding protein 47	Rbm47	Q66H68	C		0.0 ± 0.0	1.0 ± 0.6	0.124			0.7 ± 0.3	0.243
Rngtt protein	Rngtt	B5DFA8	M		1.2 ± 0.8					0.6 ± 0.3	0.47
Saccharopine dehydrogenase-like oxidoreductase	Sccpdh	Q6AY30	M	1	25.2 ± 9.4					17.6 ± 1.5	0.47
SEC31-like 1 (S. cerevisiae), isoform CRA_b	Sec31a	D3Z905	C		4.0 ± 0.6	2.7 ± 1.2	0.379			1.7 ± 1.2	0.288
Selenium-binding protein 1	Selenbp1	Q8VIF7	M		7.5 ± 3.3					5.7 ± 1.2	0.64
Selenocysteine lyase	Scly	Q68FT9	M		1.2 ± 1.2					1 ± 1	0.9
Selenocysteine lyase	Scly	Q68FT9	C		0.7 ± 0.7	1.0 ± 0.6	0.839			2.3 ± 1.5	0.203
Sepiapterin reductase	Spr	P18297	M		4.9 ± 3.8					4.2 ± 0.3	0.87
Serine (Or cysteine) proteinase inhibitor, clade H, member 1, isoform CRA_b	Serpinh1	Q5RJR9	M		24 ± 5.6					26.4 ± 6.2	0.79
Serine hydroxymethyltransferase	Shmt2	Q5U3Z7	M		54.1 ± 18.2					57.9 ± 5.1	0.85
Serine hydroxymethyltransferase	Shmt1	Q6TXG7	AM	0	2.00 ± 0.6	1.00 ± 0.0	0.225	1.00 ± 0.0	0.225	1.00 ± 0.0	0.225
Serine hydroxymethyltransferase	Shmt1	Q6TXG7	C		25.0 ± 3.2	36.0 ± 14.7	0.553			8.3 ± 1.2	0.247
Serine/threonine-protein kinase TNNI3K	Tnni3k	Q7TQP6	M		2 ± 1.5					1.3 ± 1.3	0.7
Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform	Ppp2ca	P63331	C		2.7 ± 1.8	2.7 ± 1.8	0.947			2.0 ± 1.2	0.946
Serum albumin	Alb	P02770	M		51.9 ± 8					50 ± 10.1	0.89
S-formylglutathione hydrolase	Esd	B0BNE5	C		4.3 ± 2.2	5.3 ± 2.3	0.836			1.7 ± 0.9	0.411
Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial	Acadsb	P70584	M		13.8 ± 3.5					14.1 ± 3.6	0.94
Short-chain specific acyl-CoA dehydrogenase, mitochondrial	Acads	P15651	M		32.7 ± 1.7					40.1 ± 4.7	0.21
Sideroflexin 2, isoform CRA_a	Sfxn2	G3V8N0	M	4	1.9 ± 1.3					2.4 ± 1.1	0.77
Sideroflexin-1	Sfxn1	Q63965	M	2	50.6 ± 11.1					63.6 ± 8.9	0.41
Similar to 2210023G05Rik protein (Predicted)	Ces2g	D3ZXQ0	M	1	5.2 ± 3					15 ± 5.3	0.18
Similar to C50H11.1, isoform CRA_a	Acsf3	D3ZUX7	M		14.2 ± 5.8					24.3 ± 3.9	0.22
Similar to cytoplasmic beta-actin (Predicted)	Actbl2	D3ZRN3	M		66.2 ± 9.4					60.9 ± 5.8	0.65
Similar to Glutathione S-transferase, theta 3 (Predicted)	Gstt1	D3Z8I7	C		10.0 ± 3.1	14.7 ± 0.7	0.882			20.3 ± 11.7	0.366
Similar to Glutathione S-transferase, theta 3 (Predicted)	Gstt1	D3Z8I7	M		21.9 ± 8.1					25.4 ± 9.7	0.79
Similar to intracellular membrane-associated calcium-independent phospholipase A2 gamma (Predicted), isoform CRA_b	RGD1311444_predicted	D3ZRC4	M		2.9 ± 2.9					1.3 ± 0.9	0.61
Similar to ionized calcium binding adapter molecule 2 (Iba2) (Predicted)	Aif1l	D3ZRD9	M		5.6 ± 3.6					1.2 ± 1.2	0.3
Similar to KIAA1749 protein (Predicted), isoform CRA_a	Cgnl1	D4A3V5	M		0 ± 0					2.1 ± 0.9	0.063
Similar to Neuropilin-and tolloid-like protein 1 (Predicted)	Neto1	D4AAD6	M	1	2.7 ± 1.4					1.9 ± 0.6	0.58
Similar to pM5 protein; DNA segment, Chr 7, ERATO Doi 156, expressed (Predicted)	Nomo1	D3ZSA9	M		4.5 ± 3					4.5 ± 1.9	0.99
Similar to Protein C8orf1 (HT41) (Predicted), isoform CRA_b	Osgin2	D3ZB49	M		0 ± 0					0.6 ± 0.6	0.37
Similar to putative lipid kinase (Predicted), isoform CRA_c	Agk	D3Z9L0	M		1.9 ± 1					4.5 ± 1.6	0.23
Similar to RIKEN cDNA 0610010D20 (Predicted)	Hoga1	D4A2K1	M		67.3 ± 5.3					77.5 ± 4.3	0.21
Similar to RIKEN cDNA 1810014F10 gene	RGD1311186	D4ACG8	AM	0	2.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	1.00 ± 0.0	1
Similar to RIKEN cDNA 1810022C23	Eci3	Q5M884	M		2.7 ± 2.1					8.6 ± 2.7	0.16
Similar to RIKEN cDNA 1810022C23	Eci3	Q5M884	C		2.0 ± 1.5	0.0 ± 0.0	0.238			1.3 ± 1.3	0.775
Similar to RIKEN cDNA 2810055F11 (Predicted)	RGD1305721	D3ZV91	M		6.2 ± 4					2.4 ± 0.6	0.4
Similar to RIKEN cDNA 2810055F11 (Predicted)	RGD1305721	D3ZV91	C		4.7 ± 2.0	5.7 ± 3.2	0.998			3.3 ± 1.5	0.742
Similar to RIKEN cDNA 5730502D15 gene (Predicted)	Trabd	D3ZML4	M		1.1 ± 1.1					0 ± 0	0.37
Similar to RIKEN cDNA C630028N24 gene (Predicted), isoform CRA_b	Agphd1	D3ZUX1	M		0.8 ± 0.4					0.7 ± 0.7	0.83
Similar to RIKEN cDNA C630028N24 gene (Predicted), isoform CRA_b	Agphd1	D3ZUX1	C		12.3 ± 4.1	15.7 ± 0.9	0.792			17.0 ± 7.5	0.431
Similar to serine hydolase like protein, isoforms Serhl-2 (Predicted)	Serhl2	D4A071	M		3.3 ± 1.9					6.7 ± 2.2	0.31
Similar to SNF2/RAD54 family protein (Predicted)	Ercc6l	D4A0G9	M		0.8 ± 0.8					0 ± 0	0.37
Slc22a1	Slc22a1	D4A656	AM	12	2.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	1.00 ± 0.0	1
Slc25a3 protein	Slc25a3	Q6IRH6	AM	2	1.00 ± 0.0	3.33 ± 0.7	0.073	4.33 ± 1.8	0.199	1.67 ± 0.7	0.423
Slc5a10 protein	Slc5a10	B1WBS5	AM	13	3.67 ± 2.2	1.00 ± 0.0	0.347	1.00 ± 0.0	0.347	8.33 ± 1.5	0.215
Sodium- and chloride-dependent creatine transporter 1	Slc6a8	P28570	M	12	3.8 ± 3.2					2.8 ± 1.9	0.79
Sodium- and chloride-dependent creatine transporter 1	Slc6a8	P28570	AM	12	3.67 ± 1.5	1.00 ± 0.0	0.208	1.00 ± 0.0	0.208	1.00 ± 0.0	0.208
Sodium/glucose cotransporter 1	Slc5a1	P53790	AM	14	2.67 ± 1.2	1.00 ± 0.0	0.3	1.33 ± 0.3	0.27	1.67 ± 0.7	0.58
Sodium/glucose cotransporter 2	Slc5a2	P53792	M	14	73.1 ± 34.6					57.9 ± 9.2	0.69
Sodium/glucose cotransporter 2	Slc5a2	P53792	AM	14	21.67 ± 0.7	37.67 ± 0.	0.005	37.33 ± 3.	0.071	20.00 ± 1.	0.13
Sodium/hydrogen exchanger 3	Slc9a3	P26433	M	12	11.5 ± 0.5					13.4 ± 2.9	0.52
Sodium/potassium- ATPase subunit beta-1	Atp1b1	P07340	AM	1	40.00 ± 2.1	57.00 ± 4.	0.085	51.00 ± 1.	0.049	53.33 ± 0.	0.01
Sodium/potassium-ATPase subunit alpha-1	Atp1a1	P06685	AM	10	57.67 ± 4.4	112.67 ± 3	0.017	101.67 ± 1	0.017	95.67 ± 8.	0.026
Sodium/potassium-transporting ATPase subunit alpha-1	Atp1a1	P06685	M	10	307.7 ± 45.7					272.2 ± 32.7	0.56
Sodium/potassium-transporting ATPase subunit alpha-1	Atp1a1	P06685	C		13.7 ± 2.3	0.7 ± 0.3	0.003			1.0 ± 0.6	0.003
Sodium/potassium-transporting ATPase subunit beta-1	Atp1b1	P07340	M	1	58.5 ± 17.5					43.9 ± 3.2	0.46
Sodium/potassium-transporting ATPase subunit beta-1	Atp1b1	P07340	C		8.0 ± 3.2	1.7 ± 1.7	0.064			0.0 ± 0.0	0.037
Sodium-dependent glucose transporter 1	Naglt1	Q80T22	M	11	3.8 ± 3.8					8.4 ± 2.3	0.35
Sodium-dependent neutral amino acid transporter B(0)AT1	Slc6a19	Q2A865	M	12	14.7 ± 7.6					6 ± 2.2	0.33
Sodium-dependent phosphate transport protein 2A	Slc34a1	Q06496	M	11	36.9 ± 5.8					31.3 ± 1.7	0.41
Sodium-dependent phosphate transport protein 2A	Slc34a1	Q06496	AM	11	11.00 ± 6.5	4.33 ± 0.3	0.423	8.00 ± 2.1	0.628	9.33 ± 0.9	0.839
Sodium-dependent phosphate transport protein 2C	Slc34a3	Q8K4R8	M	11	6.3 ± 2.9					2.7 ± 1	0.3
Sodium-dependent phosphate transport protein 2C	Slc34a3	Q8K4R8	AM	11	3.33 ± 0.9	5.67 ± 0.7	0.25	7.33 ± 1.8	0.12	4.67 ± 1.9	0.667
Solute carrier family 12 member 3	Slc12a3	P55018	M	11	1.6 ± 0.8					0.4 ± 0.4	0.21
Solute carrier family 13	Slc13a3	A2VD10	AM	11	1.33 ± 0.3	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423
Solute carrier family 2, facilitated glucose transporter member 2	Slc2a2	P12336	M	11	4.9 ± 3.8					1.9 ± 1.1	0.48
Solute carrier family 22 12	Slc22a12	Q3ZAV1	AM	10	1.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	1.67 ± 0.7	0.423
Solute carrier family 22 8	Slc22a8	Q9R1U7	AM	9	3.67 ± 2.2	1.00 ± 0.0	0.347	1.33 ± 0.3	0.434	4.33 ± 2.0	0.84
Solute carrier family 22 member 12	Slc22a12	Q3ZAV1	M	10	0.4 ± 0.4					1.3 ± 0.8	0.4
Solute carrier family 22 member 5	Slc22a5	O70594	M	11	4.2 ± 1.4					2.1 ± 0.3	0.2
Solute carrier family 22 member 6	Slc22a6	O35956	M	8	3.8 ± 0.7					7.1 ± 2.6	0.28
Solute carrier family 22 member 8	Slc22a8	Q9R1U7	M	9	5.3 ± 0.7					3 ± 1.7	0.25
Solute carrier family 25 (Mitochondrial carrier; adenine nucleotide translocator), member 3, isoform CRA_c	Slc25a3	G3V741	M	2	164.5 ± 17.4					137.5 ± 19.5	0.36
Solute carrier family 25 (Mitochondrial carrier; ornithine transporter) member 15	Slc25a15	D4A575	M		12.1 ± 8.6					5 ± 1.8	0.46
Solute carrier family 25 (Mitochondrial carrier; oxoglutarate carrier), member 11, isoform CRA_b	Slc25a11	G3V6H5	M		28.1 ± 12.1					29.3 ± 7.1	0.94
Solute carrier family 25 member 42	Slc25a42	P0C546	M	1	1.5 ± 0.8					4.2 ± 2.1	0.29
Solute carrier family 43, member 2 (Predicted), isoform CRA_a	Slc43a2	D3ZDC2	M	12	10.3 ± 6.9					6.6 ± 1.8	0.63
Sorbitol dehydrogenase	Sord	P27867	M		27.9 ± 13.1					10.3 ± 3.4	0.26
Sorbitol dehydrogenase	Sord	P27867	AM	0	11.00 ± 1.2	1.00 ± 0.0	0.013	1.00 ± 0.0	0.013	1.00 ± 0.0	0.013
Sorbitol dehydrogenase	Sord	P27867	C		43.7 ± 9.3	32.3 ± 17.4	0.293			28.0 ± 13.0	0.42
Sorting and assembly machinery component 50 homolog	Samm50	Q6AXV4	M		39.7 ± 8.3					42.7 ± 7.4	0.8
Sorting nexin 2	Snx2	B2RYP4	C		2.3 ± 1.5	0.7 ± 0.3	0.264			0.0 ± 0.0	0.097
Sorting nexin-3	Snx3	Q5U211	M		9.9 ± 5					3 ± 1.4	0.26
Sorting nexin-5	Snx5	B1H267	C		2.0 ± 1.0	1.7 ± 0.9	0.589			1.7 ± 0.3	0.727
Spectrin alpha chain, brain	Sptan1	P16086	M		162.2 ± 47.5					87.2 ± 6.9	0.19
Spectrin alpha chain, brain	Sptan1	P07632	C		22.0 ± 10.3	25.0 ± 10.2	0.988			19.7 ± 10.7	0.985
Spectrin beta 2, isoform CRA_a	Sptbn1	G3V6S0	M		94 ± 18.4					71.2 ± 9.1	0.33
Spectrin beta 2, isoform CRA_a	Sptbn1	G3V6S0	C		14.0 ± 9.5	17.0 ± 2.6	0.997			22.3 ± 12.0	0.484
Sperm specific antigen 2 (Predicted)	Ssfa2	D3ZLC3	C		0.7 ± 0.7	0.0 ± 0.0	0.267			0.0 ± 0.0	0.267
S-phase kinase-associated protein 1	Skp1	Q6PEC4	C		1.3 ± 0.9	0.3 ± 0.3	0.138			0.3 ± 0.3	0.145
Sphingosine-1-phosphate lyase 1	Sgpl1	Q8CHN6	M		1.5 ± 1.5					0.4 ± 0.4	0.48
Srrm1 protein	Srrm1	B2RYB3	C		0.0 ± 0.0	0.7 ± 0.7	0.267			0.0 ± 0.0	1
Stomatin-like protein 2	Stoml2	Q4FZT0	M		17.3 ± 3.4					11.6 ± 1.1	0.19
Stress-induced-phosphoprotein 1	Stip1	O35814	C		3.3 ± 2.4	7.0 ± 2.6	0.377			2.3 ± 0.3	0.83
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	Sdha	Q920L2	M		244.2 ± 16.1					290.8 ± 15.1	0.1
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial	Sdhb	P21913	M		14.2 ± 4.2					23.8 ± 4.4	0.18
Succinate dehydrogenase complex, subunit C, integral membrane protein	Sdhc	Q641Z9	M	3	33.5 ± 6.1					33.7 ± 1.1	0.97
Succinate dehydrogenase flavoprotein subunit	Sdha	Q920L2	AM	0	2.67 ± 1.2	13.00 ± 1.	0.007	10.33 ± 3.	0.184	8.00 ± 3.0	0.15
Succinate dehydrogenase iron-sulfur subunit	Sdhb	P21913	AM	0	1.00 ± 0.0	3.67 ± 1.2	0.157	2.00 ± 0.6	0.225	3.67 ± 1.7	0.251
Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial	Suclg1	P13086	M	1	30.5 ± 10.4					39 ± 0.7	0.46
Succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondrial	Oxct1	B2GV06	M		129.8 ± 39.1					114.2 ± 10	0.72
Sulfate anion transporter 1	Slc26a1	P45380	M	9	6.8 ± 1					4 ± 1.2	0.12
Sulfite oxidase, mitochondrial	Suox	Q07116	M		40 ± 8.6					34 ± 4.5	0.57
Sulfotransferase 1C2	Sult1c2	Q9WUW8	AM	0	3.67 ± 0.9	6.00 ± 1.0	0.336	1.67 ± 0.7	0.074	1.00 ± 0.0	0.094
Sulfotransferase 1C2A	Sult1c2a	Q9WUW9	M		69.8 ± 27.5					19.5 ± 4.1	0.14
Sulfotransferase 1C2A	Sult1c2a	Q9WUW9	AM	0	5.67 ± 0.7	4.67 ± 2.0	0.742	2.67 ± 0.9	0.189	5.67 ± 0.7	1
Sulfotransferase 1C2A	Sult1c2a	Q9WUW9	C		76.3 ± 36.3	56.0 ± 14.6	0.45			44.7 ± 21.1	0.476
Superoxide dismutase [Cu-Zn]	Sod1	P07632	M		31.5 ± 9					33.9 ± 3.4	0.81
Superoxide dismutase [Cu-Zn]	Sod1	Q6LDS4	AM	0	4.67 ± 2.0	1.00 ± 0.0	0.212	1.00 ± 0.0	0.212	1.00 ± 0.0	0.212
Superoxide dismutase [Cu-Zn]	Sod1	P07632	C		72.7 ± 40.1	41.7 ± 27.2	0.396			55.3 ± 27.0	0.912
Superoxide dismutase [Mn], mitochondrial	Sod2	P07895	M		67.9 ± 13.3					69.5 ± 2.7	0.91
Sushi domain containing 2	Susd2	D3ZEV8	AM	0	30.00 ± 2.5	19.00 ± 2.	0.019	28.67 ± 6.	0.762	38.67 ± 0.	0.122
Sushi domain containing 2 (Predicted), isoform CRA_a	Susd2	D3ZEV8	M		48.2 ± 10.2					35.9 ± 4.7	0.33
Synaptojanin-2-binding protein	Synj2bp	Q9WVJ4	M	1	20.5 ± 9.3					23.2 ± 4.2	0.8
Synaptosomal-associated protein 23	Snap23	O70377	M		1.6 ± 1					0.7 ± 0.4	0.42
Synaptosomal-associated protein 23	Snap23	O70377	AM	0	1.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	2.00 ± 0.6	0.225
Syntaxin-binding protein 2	Stxbp2	Q62753	M		3.7 ± 3.7					0.6 ± 0.3	0.45
T-complex protein 1 subunit alpha	Tcp1	P28480	M		2.3 ± 1.2					0 ± 0	0.11
T-complex protein 1 subunit alpha	Tcp1	P28480	C		5.7 ± 4.2	3.7 ± 1.3	0.578			2.7 ± 2.2	0.537
T-complex protein 1 subunit beta	Cct2	Q5XIM9	M		4.3 ± 1.2					1.5 ± 0.3	0.076
T-complex protein 1 subunit beta	Cct2	Q5XIM9	C		17.3 ± 13.8	8.3 ± 2.2	0.419			2.3 ± 0.9	0.247
T-complex protein 1 subunit delta	Cct4	Q7TPB1	C		9.7 ± 5.2	3.3 ± 1.9	0.187			3.0 ± 1.0	0.229
T-complex protein 1 subunit epsilon	Cct5	Q68FQ0	C		14.3 ± 2.3	14.3 ± 5.7	0.905			14.0 ± 10.0	0.993
T-complex protein 1 subunit gamma	Cct3	Q6P502	M		2.4 ± 1.3					0.4 ± 0.4	0.21
T-complex protein 1 subunit gamma	Cct3	Q6P502	C		2.7 ± 1.5	2.3 ± 1.9	0.661			1.7 ± 0.3	0.687
Tektin-1	Tekt1	Q99JD2	M		0.5 ± 0.5					1.2 ± 1.2	0.58
Testis expressed 264	Tex264	Q5XIF0	M	1	3.4 ± 1.3					0.9 ± 0.6	0.14
Thiomorpholine-carboxylate dehydrogenase	Crym	Q9QYU4	M		6.9 ± 4.7					4.6 ± 2.3	0.68
Thiomorpholine-carboxylate dehydrogenase	Crym	Q9QYU4	C		16.7 ± 15.7	10.3 ± 9.4	0.673			11.3 ± 5.5	0.947
Thioredoxin	Txn	P11232	AM	0	2.00 ± 0.6	1.00 ± 0.0	0.225	1.00 ± 0.0	0.225	1.00 ± 0.0	0.225
Thioredoxin	Txn	P11232	C		14.0 ± 10.5	5.3 ± 2.0	0.323			9.0 ± 1.5	0.814
Thioredoxin domain containing 13	Tmx4	G3V912	M	1	0.4 ± 0.4					1.2 ± 0.6	0.3
Thioredoxin domain containing 17	Txndc17	B0K010	C		4.3 ± 4.3	2.3 ± 2.3	0.613			0.0 ± 0.0	0.317
Thioredoxin reductase 1, cytoplasmic	Txnrd1	O89049	M		1.2 ± 0.8					2.7 ± 0.6	0.17
Thioredoxin reductase 1, isoform CRA_a	Txnrd1	G3V9V0	C		4.0 ± 2.6	4.7 ± 4.2	0.888			1.0 ± 1.0	0.435
Thioredoxin, mitochondrial	Txn2	P97615	M		5.1 ± 2.2					3 ± 0.4	0.39
Thioredoxin-dependent peroxide reductase, mitochondrial	Prdx3	Q9Z0V6	M		63.7 ± 6.7					76.2 ± 4.3	0.19
Thiosulfate sulfurtransferase	Tst	P24329	M		134.5 ± 5.2					137.9 ± 6.3	0.7
Threonine synthase-like 2	Thnsl2	Q5M7T9	M		2.7 ± 1.7					1.2 ± 0.4	0.42
Threonine synthase-like 2	Thnsl2	Q5M7T9	C		52.7 ± 7.7	71.0 ± 10.7	0.322			47.0 ± 8.5	0.989
Tissue alpha-L-fucosidase	Fuca1	P17164	M	1	1.6 ± 0.8					3.6 ± 1.4	0.27
Tissue-type transglutaminase	Tgm2	Q9WVJ6	M		5.6 ± 3.6					0 ± 0	0.19
Tissue-type transglutaminase	Tgm2	Q9WVJ6	C		7.3 ± 1.9	11.7 ± 1.9	0.509			2.3 ± 1.9	0.135
Transaldolase	Taldo1	Q9EQS0	C		4.7 ± 2.9	11.0 ± 2.1	0.152			2.0 ± 0.6	0.558
Transcobalamin-2	Tcn2	Q9R0D6	M		1.9 ± 1.9					2.8 ± 1.4	0.73
Transcription factor A, mitochondrial	Tfam	Q91ZW1	M		7.2 ± 1.9					3.3 ± 1.3	0.16
Transforming protein RhoA	Rhoa	P61589	M		20.5 ± 4.5					17.2 ± 5.7	0.67
Transgelin-2	Tagln2	Q5XFX0	M		3.8 ± 2.8					3.6 ± 1	0.97
Transgelin-2	Tagln2	Q5XFX0	C		10.3 ± 2.7	9.3 ± 0.7	0.419			3.7 ± 0.9	0.027
Transient receptor potential cation channel subfamily V member 4	Trpv4	Q9ERZ8	M	6	12.2 ± 3.7					7.5 ± 1.3	0.29
Transitional endoplasmic reticulum ATPase	Vcp	P46462	M		14.5 ± 7.7					10.9 ± 4.8	0.71
Transitional endoplasmic reticulum ATPase	Vcp	P46462	AM	0	12.00 ± 0.6	14.00 ± 1.	0.321	11.33 ± 0.	0.529	10.67 ± 0.	0.456
Transitional endoplasmic reticulum ATPase	Vcp	P46462	C		31.7 ± 12.4	57.3 ± 21.7	0.227			18.7 ± 5.0	0.573
Transketolase	Tkt	P50137	AM	0	13.00 ± 2.6	1.00 ± 0.0	0.045	1.00 ± 0.0	0.045	3.67 ± 2.2	0.082
Transketolase, isoform CRA_a	Tkt	G3V826	M		49.7 ± 21.1					17.1 ± 3.9	0.2
Transketolase, isoform CRA_a	Tkt	G3V826	C		104.3 ± 12.8	119.7 ± 6.1	0.916			118.0 ± 36.2	0.655
Translationally-controlled tumor protein	Tpt1	P63029	C		1.7 ± 1.2	8.0 ± 1.5	0.004			1.0 ± 1.0	0.798
Translocator of inner mitochondrial membrane 44, isoform CRA_b	Timm44	G3V640	M		33.6 ± 8.1					32.6 ± 4.8	0.92
Translocon-associated protein subunit delta	Ssr4	Q07984	M	1	3.2 ± 1.2					6.1 ± 2.7	0.37
Transmembrane 9 superfamily member 4	Tm9sf4	Q4KLL4	M	9	1.2 ± 1.2					0 ± 0	0.37
Transmembrane emp24 domain-containing protein 10	Tmed10	Q63584	M	2	11.1 ± 1.4					10.1 ± 1.6	0.67
Transmembrane emp24 domain-containing protein 2	Tmed2	Q63524	M	2	2 ± 1.4					1.5 ± 1.1	0.82
Transmembrane protein 126A	Tmem126a	Q5HZA9	M	3	5.9 ± 2.8					3.3 ± 0.9	0.42
Transporter	Slc6a19	D4A4Q0	AM	10	13.00 ± 1.5	15.00 ± 4.	0.597	15.00 ± 3.	0.51	6.33 ± 0.9	0.017
Transporter	Slc6a18	D3ZNC8	AM	10	3.00 ± 1.0	3.67 ± 0.9	0.635	9.33 ± 0.3	0.034	1.00 ± 0.0	0.184
Transthyretin	Ttr	P02767	M		0.8 ± 0.4					2.1 ± 1.2	0.35
Tricarboxylate transport protein, mitochondrial	Slc25a1	P32089	M		48.7 ± 5.4					72.1 ± 11.6	0.14
Trifunctional enzyme subunit alpha, mitochondrial	Hadha	Q64428	M		139.5 ± 18.5					186.9 ± 24.2	0.19
Trifunctional enzyme subunit alpha, mitochondrial	Hadha	Q64428	AM	0	1.00 ± 0.0	14.67 ± 2.	0.042	11.67 ± 3.	0.103	2.67 ± 1.7	0.423
Trifunctional enzyme subunit beta, mitochondrial	Hadhb	Q60587	M		43.1 ± 2.3					43.5 ± 9.7	0.97
Triosephosphate isomerase	Tpi1	P48500	M		54.8 ± 9.7					32.2 ± 2.9	0.087
Triosephosphate isomerase	LOC500959	Q6SA19	AM	0	7.67 ± 0.3	1.00 ± 0.0	0.003	1.00 ± 0.0	0.003	1.00 ± 0.0	0.003
Triosephosphate isomerase	Tpi1	P48500	C		65.3 ± 15.9	57.0 ± 14.6	0.167			29.7 ± 5.0	0.02
tRNA modification GTPase GTPBP3, mitochondrial	Gtpbp3	Q5PQQ1	M		1.1 ± 0.7					2.4 ± 0.8	0.27
tRNA-splicing ligase RtcB homolog	N/A	Q6AYT3	C		1.0 ± 1.0	0.0 ± 0.0	0.388			1.3 ± 0.9	0.779
Tuba1b	Tuba1b	D4A8I4	AM	0	1.00 ± 0.0	1.67 ± 0.7	0.423	1.33 ± 0.3	0.423	4.00 ± 3.0	0.423
Tubulin alpha-1B chain	Tuba1b	Q6P9V9	M		64.3 ± 18.4					53.2 ± 3.1	0.58
Tubulin alpha-1C chain	Tuba1c	Q6AYZ1	C		189.0 ± 64.0	254.3 ± 55.1	0.571			211.0 ± 39.1	0.429
Tubulin alpha-4A chain	Tuba4a	Q5XIF6	AM	0	6.33 ± 0.3	3.00 ± 1.5	0.109	4.67 ± 2.0	0.498	5.00 ± 2.1	0.625
Tubulin alpha-4A chain	Tuba4a	Q5XIF6	C		181.7 ± 60.7	237.3 ± 51.8	0.681			195.7 ± 43.0	0.551
Tubulin beta-2A chain	Tubb2a	P85108	AM	0	1.00 ± 0.0	1.67 ± 0.3	0.184	1.67 ± 0.7	0.423	1.00 ± 0.0	1
Tubulin beta-2A chain	Tubb2a	P85108	M		105.8 ± 30.6					85.8 ± 10.2	0.57
Tubulin beta-2A chain	Tubb2a	P85108	C		247.0 ± 38.6	187.0 ± 93.6	0.403			153.3 ± 76.7	0.489
Tubulin beta-4B chain	Tubb4b	Q6P9T8	M		104.8 ± 31.7					90.4 ± 7.2	0.68
Tubulin beta-4B chain	Tubb4b	Q6P9T8	C		271.3 ± 40.7	303.3 ± 16.2	0.921			230.7 ± 3.8	0.667
Tubulin beta-5 chain	Tubb5	P69897	AM	0	1.00 ± 0.0	1.00 ± 0.0	1	1.67 ± 0.7	0.423	1.67 ± 0.7	0.423
Tubulin beta-5 chain	Tubb5	P69897	M		106.5 ± 30.1					89.7 ± 8.6	0.62
Tubulin beta-5 chain	Tubb5	P69897	C		250.7 ± 40.1	267.0 ± 32.1	0.555			223.7 ± 17.8	0.995
Tubulin, beta 6	Tubb6	Q4QQV0	AM	0	1.67 ± 0.3	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184	1.00 ± 0.0	0.184
Tubulin, beta 6	Tubb6	Q4QQV0	C		86.3 ± 14.4	79.7 ± 45.6	0.862			70.3 ± 36.8	0.92
Twinfilin-1	Twf1	Q5RJR2	C		1.0 ± 0.6	2.3 ± 1.5	0.425			0.7 ± 0.7	0.867
Uap1l1 protein	Uap1l1	B5DEH4	C		8.0 ± 3.8	3.3 ± 0.9	0.173			2.0 ± 1.2	0.111
Ube2l3 protein	Ube2l3	B2RZA9	M		3.5 ± 2					3.6 ± 0.6	0.96
Ubiquinone biosynthesis protein COQ9, mitochondrial	Coq9	Q68FT1	M		11.1 ± 5					15.8 ± 0.6	0.4
Ubiquitin carboxyl-terminal hydrolase	Usp7	F1LM09	C		0.3 ± 0.3	0.7 ± 0.7	0.507			0.0 ± 0.0	0.676
Ubiquitin-60S ribosomal protein L40	Uba52	P62986	AM	0	7.67 ± 1.5	6.67 ± 1.8	0.73	2.67 ± 0.9	0.13	2.33 ± 0.9	0.15
Ubiquitin-conjugating enzyme E2 N	Ube2n	Q9EQX9	C		1.0 ± 1.0	1.3 ± 0.9	0.98			0.0 ± 0.0	0.331
Ubiquitin-conjugating enzyme E2M (UBC12 homolog, yeast) (Predicted), isoform CRA_a	Ube2m	D3ZNQ6	C		0.7 ± 0.7	3.7 ± 0.3	0.034			0.7 ± 0.7	0.914
Ubiquitin-like modifier-activating enzyme 1	Uba1	Q5U300	C		11.0 ± 7.1	7.3 ± 4.5	0.584			5.3 ± 5.3	0.562
UDP-glucose 6-dehydrogenase	Ugdh	O70199	M		4.6 ± 3.5					1.5 ± 0.9	0.43
UDP-glucose dehydrogenase, isoform CRA_a	Ugdh	G3V6C4	C		21.7 ± 4.4	29.3 ± 4.2	0.848			31.7 ± 13.2	0.408
UDP-glucose:glycoprotein glucosyltransferase 1	Uggt1	Q9JLA3	M	1	3 ± 2					3.6 ± 1	0.79
UDP-glucuronosyltransferase 1-1	Ugt1a1	Q64550	M	2	11.1 ± 1.9					54.2 ± 4.5	0.001
UDP-glucuronosyltransferase 1-1	Ugt1a1	Q64550	AM	2	1.00 ± 0.0	1.00 ± 0.0	1	1.33 ± 0.3	0.423	3.33 ± 1.5	0.25
UDP-glucuronosyltransferase 1-6	Ugt1	P08430	M	1	19.5 ± 9.2					34.1 ± 8.3	0.3
UDP-glucuronosyltransferase 2B15	Ugt2b15	P36511	M	1	1.9 ± 1					17 ± 0.8	0
UDP-glucuronosyltransferase 2B15	Ugt2b15	P36511	AM	1	1.00 ± 0.0	7.00 ± 1.5	0.059	10.67 ± 5.	0.206	6.33 ± 4.4	0.347
UMP-CMP kinase	Cmpk1	Q4KM73	M		4.7 ± 1.8					7.7 ± 4.7	0.58
UMP-CMP kinase	Cmpk1	Q4KM73	C		8.7 ± 2.9	11.3 ± 2.8	0.935			7.7 ± 3.3	0.769
Uncharacterized protein	Abca2	D3ZD68	M	9	1.5 ± 1.5					1.5 ± 1.5	0.97
Uncharacterized protein	Acaa1b	F1LPD6	M		11.4 ± 1.1					28.5 ± 2.9	0.005
Uncharacterized protein	Aco1	D4ACL3	M	1	11.5 ± 8.1					13.3 ± 4.2	0.85
Uncharacterized protein	Add3	D4A3Q7	M		1.9 ± 1.9					2.2 ± 0.9	0.91
Uncharacterized protein	Aldh8a1	D3ZXY4	M		20.8 ± 8.5					23.8 ± 2.2	0.75
Uncharacterized protein	Apool	D3Z9T6	M		9.8 ± 2.2					8.1 ± 1.4	0.53
Uncharacterized protein	Arhgef19	D4ACS5	M		2.8 ± 1.2					1.9 ± 1	0.56
Uncharacterized protein	Atp5j2	D3ZAF6	M	1	33.4 ± 6.6					28.9 ± 6.2	0.64
Uncharacterized protein	Atp6v0a4	D3ZY90	M	6	17.7 ± 8					12.5 ± 1.8	0.56
Uncharacterized protein	Atp6v1h	D3ZW96	M		36.5 ± 18.4					32.6 ± 3.2	0.84
Uncharacterized protein	Basp1	F1LNN9	M		18.4 ± 7					13.5 ± 3	0.55
Uncharacterized protein	Ccdc88c	D4A9W1	M		1.5 ± 1.5					1.2 ± 1.2	0.88
Uncharacterized protein	Cep290	D4A5F2	M		1.3 ± 1.3					0.9 ± 0.6	0.82
Uncharacterized protein	Cfb	D4A0Y1	M		1.2 ± 0.8					7.7 ± 1.4	0.014
Uncharacterized protein	Chd5	D3ZD32	M		0.8 ± 0.4					0.7 ± 0.7	0.83
Uncharacterized protein	Cisd3	D4AA84	M		1.5 ± 1					1.2 ± 0.3	0.79
Uncharacterized protein	Ckap4	D3ZH41	M	1	4.9 ± 3.8					4.8 ± 0.6	0.98
Uncharacterized protein	Col6a3	D4A115	M	1	0.8 ± 0.4					3.4 ± 2	0.28
Uncharacterized protein	Cox6b1	D3ZD09	M		72.3 ± 2					58.9 ± 13.6	0.38
Uncharacterized protein	Cyp4f39	D4A1H9	M	1	1.2 ± 0.8					1.8 ± 0.5	0.54
Uncharacterized protein	Dnah8	F1MAM6	M		0.8 ± 0.8					2.7 ± 0.5	0.095
Uncharacterized protein	Dnaja3	E9PSW5	M		11.4 ± 6.1					8.7 ± 2.2	0.69
Uncharacterized protein	Dnm3	D4AAL9	M		3 ± 3					1.5 ± 0.3	0.64
Uncharacterized protein	Dpp4	F1M7X5	M	1	132.4 ± 19					123.3 ± 9.3	0.69
Uncharacterized protein	Eprs	F1LMJ9	M		1.2 ± 0.7					0.7 ± 0.7	0.57
Uncharacterized protein	Flnb	D3ZD13	M		4.3 ± 0.5					2.1 ± 0.4	0.023
Uncharacterized protein	Ganab	D4A0W9	M	1	16.3 ± 1.4					21 ± 4.2	0.35
Uncharacterized protein	Gldc	D3ZJJ9	M		101.8 ± 23.8					167.3 ± 30.9	0.17
Uncharacterized protein	Gm2a	D3ZR01	M		20.5 ± 6					32.3 ± 7.3	0.28
Uncharacterized protein	Grhpr	D4A6S1	M		5 ± 2.3					4.2 ± 1.2	0.77
Uncharacterized protein	Grsf1	F1LMB8	M		1.5 ± 1					4.4 ± 2.2	0.28
Uncharacterized protein	Gstt1	D3ZUM0	M		16.1 ± 6.3					19.3 ± 2.3	0.65
Uncharacterized protein	Hagh	F1LQI1	M		13.2 ± 1.7					11 ± 0.6	0.28
Uncharacterized protein	Hccs	D3ZL85	M		6.4 ± 1.5					5.1 ± 0.9	0.5
Uncharacterized protein	Hectd1	D3ZLS5	M		0.9 ± 0.9					1.9 ± 1	0.47
Uncharacterized protein	Hsd17b10	F1LNT4	M		138.1 ± 25.1					148.4 ± 1.2	0.7
Uncharacterized protein	Hspa9	F1M953	M		123.7 ± 32.3					162 ± 19.2	0.36
Uncharacterized protein	Idh3a	F1LNF7	M		62.1 ± 7.7					57.2 ± 13	0.76
Uncharacterized protein	Immt	D3ZSD1	M		112.5 ± 20					128.5 ± 11.8	0.53
Uncharacterized protein	Irf9	D3ZV47	M		1.5 ± 0.8					0.3 ± 0.3	0.21
Uncharacterized protein	Krt10	D3ZBV7	M		27.4 ± 3.7					20.9 ± 1.7	0.18
Uncharacterized protein	Ktn1	D4ADW6	M	1	0.4 ± 0.4					1.9 ± 1	0.22
Uncharacterized protein	Lama5	F1MAN8	M		4.5 ± 3.5					2.5 ± 0.9	0.59
Uncharacterized protein	Lamc1	F1MAA7	M	1	3.8 ± 2					0.3 ± 0.3	0.16
Uncharacterized protein	LOC100359876	F8WFR8	M		0.8 ± 0.8					2.4 ± 0.7	0.17
Uncharacterized protein	LOC100365958	F1LM78	M		1.9 ± 1.3					1.8 ± 1.4	0.96
Uncharacterized protein	LOC100366131	D4A5M0	M		4.3 ± 1					4.8 ± 0.9	0.69
Uncharacterized protein	LOC259245	E9PT15	M		71.9 ± 7.1					92 ± 10.6	0.19
Uncharacterized protein	LOC317516	F1MAP2	M		3.6 ± 1.9					2.2 ± 1.3	0.56
Uncharacterized protein	LOC685778	D4A5G8	M		89.4 ± 4.4					92.9 ± 10	0.76
Uncharacterized protein	LOC686139	D3ZXK4	M		9 ± 2.6					5.4 ± 1.2	0.27
Uncharacterized protein	LOC688963	F1LPG5	M		42.8 ± 1.5					42.3 ± 2.5	0.87
Uncharacterized protein	Maoa	D3ZFS8	M		2.6 ± 2.6					2.4 ± 1.2	0.95
Uncharacterized protein	Maob	F1LPM4	M	1	8.8 ± 3.3					2.6 ± 2.6	0.21
Uncharacterized protein	Map7d2	D4A1J8	M		2.8 ± 1.2					4.8 ± 1.1	0.26
Uncharacterized protein	Mars	D3Z941	M		0.5 ± 0.5					1.8 ± 1	0.24
Uncharacterized protein	Mccc1	F1LP30	M		44.4 ± 7.1					43.8 ± 3	0.94
Uncharacterized protein	Mecr	F1LPY7	M		6.4 ± 5.3					6 ± 0.5	0.95
Uncharacterized protein	Mipep	D3ZAI9	M		0 ± 0					1 ± 1	0.89
Uncharacterized protein	Mrpl12	D3ZXF9	M		1.5 ± 1.5					1.8 ± 1	0.54
Uncharacterized protein	Mrps36	D3Z8T2	M		7.2 ± 2.6					5.4 ± 0.7	0.96
Uncharacterized protein	Myh10	F1LQ02	M		2.6 ± 1.4					2.5 ± 2.5	0.24
Uncharacterized protein	Myh4	F1LMU0	M		28.2 ± 6.2					17.9 ± 4.3	1
Uncharacterized protein	Myo18a	D3ZFD0	M		1.2 ± 0.8					1.2 ± 0.6	0.71
Uncharacterized protein	Myo1d	D3ZKZ9	M		2.3 ± 2.3					4.5 ± 0.5	0.39
Uncharacterized protein	Myo6	D4A5I9	M		74.6 ± 13.2					57 ± 11.9	0.38
Uncharacterized protein	Myof	D4AB02	M	1	1.2 ± 0.7					1.6 ± 1.6	0.82
Uncharacterized protein	NA	D3ZNI6	M		6.6 ± 1.8					4.2 ± 0.9	0.29
Uncharacterized protein	NA	D4A5V2	M		1.2 ± 0.7					0.4 ± 0.4	0.3
Uncharacterized protein	NA	D3ZJ63	M		0.8 ± 0.8					2.1 ± 1.1	0.35
Uncharacterized protein	NA	D3ZE29	M	2	80 ± 9.2					66.9 ± 10.2	0.4
Uncharacterized protein	NA	D4ABH6	M		712.3 ± 193.7					897.8 ± 94.8	0.44
Uncharacterized protein	NA	D3ZSD6	M		81.6 ± 25.7					59.4 ± 6.2	0.45
Uncharacterized protein	NA	D4A8P9	M		11.6 ± 5.2					15.5 ± 1	0.5
Uncharacterized protein	NA	D3ZJD0	M		3.6 ± 2.2					2.2 ± 0.9	0.56
Uncharacterized protein	NA	D3ZX87	M		1.2 ± 0.7					2.5 ± 2	0.57
Uncharacterized protein	NA	E9PT51	M		0.8 ± 0.8					0.3 ± 0.3	0.59
Uncharacterized protein	NA	D3ZTX4	M	1	119.6 ± 37.2					102.3 ± 12	0.68
Uncharacterized protein	NA	D4A3J6	M	1	118.8 ± 40.8					100.8 ± 10.3	0.69
Uncharacterized protein	NA	D4AD84	M		24.3 ± 6.6					21.1 ± 3.8	0.7
Uncharacterized protein	NA	D4A5T2	M		1.5 ± 1.5					1 ± 0.6	0.75
Uncharacterized protein	NA	D3ZCN7	M		1.2 ± 0.8					1 ± 0.6	0.77
Uncharacterized protein	NA	D3ZJX5	M	1	2.2 ± 2.2					3 ± 1.6	0.79
Uncharacterized protein	NA	D4A774	M		55.7 ± 2.9					59.2 ± 13.8	0.82
Uncharacterized protein	NA	D4A9J5	M		1.2 ± 0.7					0.9 ± 0.9	0.83
Uncharacterized protein	NA	D3ZEA8	M		0.8 ± 0.4					1 ± 0.6	0.84
Uncharacterized protein	NA	D4ADA8	M		0.9 ± 0.9					0.7 ± 0.7	0.84
Uncharacterized protein	NA	F1M7S9	M		0.8 ± 0.8					0.7 ± 0.7	0.91
Uncharacterized protein	Nars2	F1LNQ5	M		0 ± 0					1.5 ± 1.1	0.24
Uncharacterized protein	Nipsnap1	D4A867	M		82.6 ± 10.5					74.4 ± 7	0.55
Uncharacterized protein	Obp3	F1LQM1	M		512.2 ± 130.1					711.8 ± 101.6	0.29
Uncharacterized protein	Pdhx	F1LQ44	M		11.4 ± 6.1					8.7 ± 2	0.7
Uncharacterized protein	Picalm	F1LR19	M		21.8 ± 7.3					15.6 ± 3.2	0.48
Uncharacterized protein	Pitrm1	D3ZKD5	M		11.3 ± 2.1					7.9 ± 3.4	0.44
Uncharacterized protein	Pls1	F1LQQ6	M		17.6 ± 7.1					6.1 ± 3.2	0.21
Uncharacterized protein	Ppa2	D4A830	M		45.3 ± 4.7					44.6 ± 13.5	0.97
Uncharacterized protein	Prodh	F1MAR6	M		5.5 ± 4.9					2.4 ± 0.8	0.56
Uncharacterized protein	Rab1	E9PU16	M		6.3 ± 3.4					11.2 ± 3.1	0.34
Uncharacterized protein	Rdx	E9PT65	M		25.6 ± 3.3					25.6 ± 5.6	1
Uncharacterized protein	RGD1308772	D3ZIN5	M		5.5 ± 2.8					9.8 ± 2.3	0.3
Uncharacterized protein	RGD1310427	D3ZFJ7	M		4.9 ± 1.3					3.4 ± 0.9	0.36
Uncharacterized protein	RGD1311756	D4A9W3	M		25.4 ± 3.6					27.8 ± 4.1	0.68
Uncharacterized protein	RGD1563398	D3ZUC6	M		2.7 ± 1.7					0.6 ± 0.3	0.27
Uncharacterized protein	Rmnd1	E9PU34	M		1.2 ± 0.7					0.4 ± 0.4	0.32
Uncharacterized protein	Sardh	D4A9I9	M		28.2 ± 9.3					29.8 ± 1.2	0.88
Uncharacterized protein	Sec63	D3ZBN7	M	3	1.9 ± 0.8					0.7 ± 0.7	0.25
Uncharacterized protein	Slc25a25	F8WFM9	M		0 ± 0					0.7 ± 0.7	0.37
Uncharacterized protein	Slc25a45	D3ZL04	M		2.2 ± 1.7					0 ± 0	0.26
Uncharacterized protein	Slc30a9	D3ZQY3	M	5	3.5 ± 1.4					3 ± 1.2	0.77
Uncharacterized protein	Stt3b	E9PTQ6	M	10	0.4 ± 0.4					1 ± 1	0.61
Uncharacterized protein	Sucla2	F1LM47	M		45.2 ± 8.7					48.3 ± 5.6	0.78
Uncharacterized protein	Sult1c2	F1LNK1	M		55.6 ± 19.5					15.5 ± 2.7	0.11
Uncharacterized protein	Tln2	D3ZA84	M		1.9 ± 1					0.6 ± 0.3	0.29
Uncharacterized protein	Tomm7	D3ZMR1	M	1	3.7 ± 1.9					4 ± 1.3	0.92
Uncharacterized protein	Tpm3	F1LRP5	M		17.7 ± 9					0.4 ± 0.4	0.12
Uncharacterized protein	Ubc	F1LML2	M		22.3 ± 8.6					17.6 ± 6.1	0.67
Uncharacterized protein	Upf3b	D3ZBE8	M		1.9 ± 1.4					2.7 ± 0.6	0.6
Uncharacterized protein	Vat1	Q3MIE4	M		3.2 ± 1.6					2.4 ± 1.5	0.73
Uncharacterized protein	Vil1	B5DFA0	M		50.2 ± 19					29.6 ± 3.7	0.35
Uncharacterized protein	Vill	D3Z8F1	M		4.2 ± 1.4					6 ± 3.8	0.68
Uncharacterized protein	Vnn1	Q4KLZ0	M		3.4 ± 2.9					4 ± 1.8	0.87
Uncharacterized protein	Vps13a	D3Z8N6	M		2.3 ± 0.7					3.6 ± 2.3	0.61
Uncharacterized protein	Vps35	G3V8A5	M		4.7 ± 2.4					1.5 ± 0.8	0.26
Uncharacterized protein	Cltc	D4AD25	C		309.3 ± 77.8	491.3 ± 59.5	0.391			389.3 ± 56.3	0.424
Uncharacterized protein	Aldh8a1	D3ZXY4	C		202.0 ± 26.9	211.0 ± 18.0	0.651			184.7 ± 12.8	0.852
Uncharacterized protein	Vil1	B5DFA0	C		58.0 ± 12.1	93.7 ± 8.5	0.328			54.3 ± 2.0	0.88
Uncharacterized protein	Aco1	D4ACL3	C		40.0 ± 4.4	102.0 ± 9.3	0.013			47.3 ± 9.5	0.443
Uncharacterized protein	Sult1c2	F1LNK1	C		64.0 ± 19.3	56.7 ± 12.3	0.469			36.0 ± 14.7	0.223
Uncharacterized protein	Gm2a	D3ZR01	C		27.3 ± 5.0	28.0 ± 8.6	0.883			23.0 ± 8.1	0.947
Uncharacterized protein	Xpnpep1	G3V8Z2	C		18.3 ± 4.5	25.0 ± 6.4	0.651			14.3 ± 7.4	0.753
Uncharacterized protein	Ubc	F1LML2	C		14.7 ± 7.8	16.0 ± 2.1	0.856			7.7 ± 0.7	0.395
Uncharacterized protein	Ank3	F1LNM3	C		6.0 ± 3.8	15.3 ± 2.2	0.316			15.3 ± 6.2	0.153
Uncharacterized protein	LOC686548	D3ZE63	C		12.3 ± 7.5	14.0 ± 5.1	0.913			4.7 ± 3.7	0.345
Uncharacterized protein	Ptgr2	D4A2P3	C		10.7 ± 5.7	14.0 ± 0.6	0.436			6.3 ± 1.9	0.481
Uncharacterized protein	Psmd12	D3Z936	C		19.7 ± 12.9	3.7 ± 3.7	0.213			5.7 ± 2.8	0.325
Uncharacterized protein	Lyz2	F1M8E9	C		8.3 ± 2.3	11.0 ± 6.7	0.927			5.0 ± 3.5	0.511
Uncharacterized protein	Grn	F1LMP7	C		7.7 ± 5.0	7.3 ± 2.0	0.974			8.3 ± 3.5	0.558
Uncharacterized protein	LOC100362298	D3ZM33	C		6.0 ± 1.2	8.3 ± 2.2	0.716			7.7 ± 0.7	0.529
Uncharacterized protein	Tpm3	F2Z3T2	C		8.0 ± 1.0	11.0 ± 4.0	0.687			3.0 ± 1.7	0.234
Uncharacterized protein	Picalm	D3ZNT9	C		5.7 ± 1.9	9.3 ± 2.3	0.436			2.7 ± 1.5	0.392
Uncharacterized protein	Npepps	F1M9V7	C		6.0 ± 1.5	6.0 ± 2.6	0.792			4.7 ± 0.9	0.687
Uncharacterized protein	RGD1562953	D3ZPL5	C		2.7 ± 1.8	4.0 ± 2.3	0.664			8.3 ± 1.8	0.041
Uncharacterized protein	Flnb	D3ZD13	C		5.7 ± 4.2	5.0 ± 1.0	0.642			3.7 ± 0.7	0.6
Uncharacterized protein	Hprt1	F1LNY0	C		6.0 ± 3.0	2.0 ± 2.0	0.206			5.7 ± 1.8	0.868
Uncharacterized protein	Acss2	D3ZUL6	C		3.3 ± 1.2	3.7 ± 1.8	0.886			6.0 ± 3.6	0.431
Uncharacterized protein	LOC100362339	D4A6G6	C		4.3 ± 1.5	6.3 ± 0.3	0.7			2.0 ± 1.5	0.284
Uncharacterized protein	Vps35	G3V8A5	C		5.3 ± 2.6	4.0 ± 1.5	0.652			2.7 ± 1.7	0.533
Uncharacterized protein	Hspa4	F1LRV4	C		2.7 ± 1.8	6.0 ± 2.1	0.127			3.0 ± 0.6	0.492
Uncharacterized protein	Xylb	G3V7T5	C		3.3 ± 1.2	8.0 ± 3.1	0.187			0.3 ± 0.3	0.303
Uncharacterized protein	Ddx19b	D3ZGK1	C		3.3 ± 1.7	4.0 ± 0.6	0.958			4.3 ± 3.0	0.676
Uncharacterized protein	Gk	D3ZNG1	C		1.7 ± 0.3	3.7 ± 3.7	0.68			6.0 ± 0.6	0.067
Uncharacterized protein	Pcbp1	D3ZS68	C		3.0 ± 0.6	4.7 ± 2.3	0.772			3.0 ± 1.2	0.983
Uncharacterized protein	Kpnb1	F2Z3Q8	C		3.3 ± 1.3	4.7 ± 0.9	0.688			2.3 ± 0.3	0.921
Uncharacterized protein	Renbp	F1LQ78	C		5.3 ± 2.0	4.3 ± 2.2	0.505			0.3 ± 0.3	0.047
Uncharacterized protein	Ddx3x	D4ADE8	C		3.0 ± 0.6	3.3 ± 0.3	0.93			3.3 ± 3.3	0.951
Uncharacterized protein	RGD1566085	D3Z8P5	C		2.0 ± 1.0	5.3 ± 1.8	0.306			2.3 ± 1.9	0.968
Uncharacterized protein	N/A	D4A774	C		0.3 ± 0.3	0.7 ± 0.7	0.977			8.3 ± 8.3	0.28
Uncharacterized protein	Atp6v1h	D3ZW96	C		3.7 ± 0.3	3.7 ± 2.7	0.942			1.7 ± 0.9	0.369
Uncharacterized protein	N/A	D3ZGX5	C		4.0 ± 1.5	1.7 ± 0.7	0.172			2.3 ± 1.2	0.467
Uncharacterized protein	Isoc1	F2Z3T7	C		3.3 ± 1.8	1.7 ± 1.7	0.337			3.0 ± 0.6	0.921
Uncharacterized protein	LOC100363073	D3ZY72	C		2.0 ± 0.6	4.0 ± 4.0	0.715			2.0 ± 1.2	0.934
Uncharacterized protein	N/A	D3ZH86	C		1.7 ± 1.2	3.0 ± 1.0	0.741			3.3 ± 2.4	0.569
Uncharacterized protein	Gsto1	D3ZJM9	C		3.3 ± 1.3	1.7 ± 1.2	0.327			2.7 ± 0.9	0.974
Uncharacterized protein	Vps26a	D3Z9J5	C		2.7 ± 0.9	3.3 ± 0.3	0.986			1.7 ± 1.2	0.547
Uncharacterized protein	Cep290	D4A5F2	C		2.0 ± 0.6	2.3 ± 1.5	0.944			3.3 ± 1.8	0.519
Uncharacterized protein	Tom1	D4A1Y4	C		2.7 ± 1.5	3.7 ± 2.7	0.904			0.7 ± 0.7	0.448
Uncharacterized protein	Gstt1	D3ZUM0	C		2.7 ± 1.7	3.3 ± 1.2	0.783			1.0 ± 0.0	0.244
Uncharacterized protein	LOC100362751	D3ZN03	C		2.3 ± 1.5	1.7 ± 0.9	0.709			3.0 ± 2.1	0.732
Uncharacterized protein	Hnrnpab	E9PTS0	C		1.3 ± 0.9	2.7 ± 1.5	0.295			2.3 ± 0.3	0.303
Uncharacterized protein	Lamc1	F1MAA7	C		1.7 ± 1.2	1.7 ± 0.9	0.942			2.7 ± 2.7	0.648
Uncharacterized protein	LOC100361715	D3ZLL8	C		0.7 ± 0.7	2.7 ± 1.5	0.294			2.3 ± 0.9	0.314
Uncharacterized protein	Idh3a	F1LNF7	C		1.0 ± 1.0	3.0 ± 2.5	0.541			1.7 ± 1.7	0.739
Uncharacterized protein	Hagh	F1LQI1	C		0.7 ± 0.3	2.3 ± 0.3	0.14			2.3 ± 0.9	0.069
Uncharacterized protein	Dnm1l	D4ABS2	C		2.0 ± 1.5	0.7 ± 0.7	0.485			2.3 ± 1.9	0.98
Uncharacterized protein	Basp1	F1LNN9	C		2.0 ± 0.6	1.3 ± 1.3	0.332			1.7 ± 0.3	0.981
Uncharacterized protein	Add1	D3ZZ99	C		1.3 ± 0.7	2.3 ± 0.9	0.634			1.3 ± 1.3	0.984
Uncharacterized protein	Pura	F1LPS8	C		1.3 ± 0.9	2.7 ± 1.2	0.561			0.7 ± 0.7	0.545
Uncharacterized protein	Eprs	F1LMJ9	C		1.7 ± 1.2	1.0 ± 0.6	0.671			2.0 ± 2.0	0.957
Uncharacterized protein	Psmc3	D3ZF94	C		1.7 ± 0.9	2.7 ± 1.8	0.781			0.3 ± 0.3	0.433
Uncharacterized protein	LOC100359563	D3ZZK1	C		1.3 ± 0.7	2.3 ± 0.9	0.363			1.0 ± 0.0	0.918
Uncharacterized protein	RGD1307222	D3ZKG9	C		1.0 ± 0.6	2.3 ± 1.2	0.424			1.3 ± 0.7	0.608
Uncharacterized protein	Nars	F1LPV0	C		1.7 ± 0.9	2.0 ± 1.0	0.948			0.7 ± 0.7	0.446
Uncharacterized protein	LOC100359503	D3ZWJ5	C		1.0 ± 1.0	2.7 ± 0.7	0.313			0.7 ± 0.7	0.764
Uncharacterized protein	RGD1564425	D3Z8J0	C		1.3 ± 0.7	2.0 ± 1.2	0.789			1.0 ± 1.0	0.725
Uncharacterized protein	Eef1d	F1LP72	C		2.7 ± 1.5	1.0 ± 0.6	0.248			0.3 ± 0.3	0.166
Uncharacterized protein	N/A	D3ZET5	C		0.3 ± 0.3	0.0 ± 0.0	0.883			3.7 ± 2.7	0.206
Uncharacterized protein	Nap1l4	D3ZE23	C		0.7 ± 0.7	2.0 ± 1.0	0.581			1.3 ± 1.3	0.573
Uncharacterized protein	N/A	D3Z982	C		1.3 ± 0.7	1.7 ± 1.7	0.876			0.7 ± 0.7	0.685
Uncharacterized protein	N/A	D4ACR0	C		0.0 ± 0.0	0.0 ± 0.0	1			3.3 ± 1.8	0.069
Uncharacterized protein	Calm1	F8WG07	C		0.7 ± 0.3	2.0 ± 1.2	0.966			0.3 ± 0.3	0.374
Uncharacterized protein	Arhgap1	D4A6C5	C		0.7 ± 0.7	2.0 ± 2.0	0.492			0.3 ± 0.3	0.906
Uncharacterized protein	Rps11	D3ZE37	C		1.7 ± 1.7	0.0 ± 0.0	0.401			1.3 ± 1.3	0.943
Uncharacterized protein	Rab2a	F1LP82	C		1.3 ± 0.9	0.3 ± 0.3	0.552			1.3 ± 1.3	0.85
Uncharacterized protein	N/A	D3ZEA8	C		0.3 ± 0.3	2.3 ± 2.3	0.372			0.3 ± 0.3	0.975
Uncharacterized protein	Acly	F1LQS4	C		0.3 ± 0.3	1.0 ± 1.0	0.832			1.3 ± 1.3	0.495
Uncharacterized protein	RGD1309903	D3ZF86	C		1.3 ± 1.3	0.3 ± 0.3	0.436			0.7 ± 0.7	0.6
Uncharacterized protein	Gsn	F8WFK3	C		2.0 ± 1.2	0.0 ± 0.0	0.077			0.3 ± 0.3	0.154
Uncharacterized protein	Krt10	D3ZBV7	C		2.3 ± 2.3	0.0 ± 0.0	0.267			0.0 ± 0.0	0.267
Uncharacterized protein	Fam120a	D4AB03	C		2.0 ± 1.5	0.0 ± 0.0	0.204			0.3 ± 0.3	0.269
Uncharacterized protein	Pls1	F1LQQ6	C		1.3 ± 0.9	0.3 ± 0.3	0.192			0.3 ± 0.3	0.25
Uncharacterized protein	N/A	D4ADG1	C		0.0 ± 0.0	0.7 ± 0.3	0.289			1.0 ± 0.6	0.097
Uncharacterized protein	N/A	D3Z976	C		0.7 ± 0.3	0.3 ± 0.3	0.626			0.7 ± 0.7	0.983
Uncharacterized protein	N/A	D3ZRQ7	C		0.7 ± 0.7	1.0 ± 1.0	0.791			0.0 ± 0.0	0.501
Uncharacterized protein	Myo6	D4A5I9	C		0.3 ± 0.3	1.3 ± 0.9	0.282			0.0 ± 0.0	0.566
Uncharacterized protein	Mki67	D4A0Y6	C		0.3 ± 0.3	0.0 ± 0.0	0.603			1.0 ± 0.6	0.259
Uncharacterized protein	Itpr1	F1LQS8	C		0.3 ± 0.3	0.7 ± 0.7	0.923			0.0 ± 0.0	0.447
Uncharacterized protein	Pdcd11	D3ZNH8	C		0.7 ± 0.7	0.3 ± 0.3	0.733			0.0 ± 0.0	0.345
Uncharacterized protein	N/A	D4A056	C		0.0 ± 0.0	0.7 ± 0.7	0.267			0.0 ± 0.0	1
Uncharacterized protein	Tmem2	D3Z855	C		0.0 ± 0.0	0.0 ± 0.0	1			0.7 ± 0.7	0.267
Uncharacterized protein (Fragment)	Abcc4	F1LR52	M	3	2.7 ± 1					0 ± 0	0.054
Uncharacterized protein (Fragment)	Abhd14b	F1M5R3	M		5.1 ± 2.7					1.3 ± 0.9	0.23
Uncharacterized protein (Fragment)	Ank3	F1LM13	M		8 ± 1.7					9.3 ± 2.7	0.69
Uncharacterized protein (Fragment)	Auh	F1LU71	M		9.2 ± 1.3					8.1 ± 0.9	0.51
Uncharacterized protein (Fragment)	Bucs1	F1M1W1	M		8.9 ± 6.6					4 ± 4	0.56
Uncharacterized protein (Fragment)	Erp44	F1M396	M		3.5 ± 1.2					1.5 ± 0.4	0.17
Uncharacterized protein (Fragment)	Gsr	F1LQY0	M		21.7 ± 5.5					21.9 ± 2.8	0.97
Uncharacterized protein (Fragment)	Ldhd	F1LVD7	M		27.1 ± 4.1					45.7 ± 4.6	0.037
Uncharacterized protein (Fragment)	LOC100360623	F1LW74	M		4.4 ± 2.3					2.5 ± 1.4	0.5
Uncharacterized protein (Fragment)	LOC100360985	F1LX07	M		7.1 ± 1.8					8.9 ± 2.4	0.57
Uncharacterized protein (Fragment)	LOC684509	F1LY36	M	1	11 ± 2.2					12.5 ± 2.1	0.65
Uncharacterized protein (Fragment)	Msn	F1LP60	M		86.3 ± 16.7					92.3 ± 14.5	0.8
Uncharacterized protein (Fragment)	Mthfd1	F1LW12	M		14.2 ± 6.3					14.4 ± 2.4	0.98
Uncharacterized protein (Fragment)	Myo5b	F1LUM1	M		1.5 ± 1					0.3 ± 0.3	0.3
Uncharacterized protein (Fragment)	Myo7b	F1M885	M		7 ± 2.1					6.3 ± 2.4	0.82
Uncharacterized protein (Fragment)	NA	F1LSP2	M		14.6 ± 6.3					6.9 ± 1.3	0.29
Uncharacterized protein (Fragment)	NA	F1M566	M		5.4 ± 5.4					0.6 ± 0.6	0.42
Uncharacterized protein (Fragment)	NA	F1M2K6	M		0.8 ± 0.8					0.4 ± 0.4	0.61
Uncharacterized protein (Fragment)	NA	F1M3J4	M	2	5.5 ± 2.3					4.5 ± 1	0.72
Uncharacterized protein (Fragment)	NA	F1LVH4	M		4.2 ± 0.9					4.5 ± 0.6	0.75
Uncharacterized protein (Fragment)	Ndufa12	F1LXA0	M		16.9 ± 4.7					14.9 ± 2.2	0.72
Uncharacterized protein (Fragment)	Nln	F1LW44	M		2.9 ± 2.4					2.5 ± 1.7	0.88
Uncharacterized protein (Fragment)	Nmnat3	F1LTJ2	M		1.9 ± 1					0 ± 0	1
Uncharacterized protein (Fragment)	Pcca	F1M8L5	M		5.4 ± 1					5.4 ± 1.9	0.7
Uncharacterized protein (Fragment)	Pck2	F1LQJ7	M		4.8 ± 2.6					6.5 ± 3.3	0.61
Uncharacterized protein (Fragment)	Pm20d1	F1M0Q9	M		6.1 ± 3.5					8.1 ± 1.6	0.81
Uncharacterized protein (Fragment)	RGD1564651	F1LUA8	M		15.2 ± 0.3					16.5 ± 5.1	0.76
Uncharacterized protein (Fragment)	Slc25a13	F1LZW6	M		0.4 ± 0.4					0.7 ± 0.7	0.93
Uncharacterized protein (Fragment)	Slc5a12	F1LW51	M	10	133.3 ± 32.3					130.2 ± 13	0.76
Uncharacterized protein (Fragment)	Suclg2	F1LPV8	M		17.1 ± 5					15.5 ± 1	0.93
Uncharacterized protein (Fragment)	Tf	F1LMP2	M	1	56.4 ± 10.2					55.4 ± 5.7	0.28
Uncharacterized protein (Fragment)	Tns1	F1LN42	M		9.7 ± 4.9					20.2 ± 7	0.3
Uncharacterized protein (Fragment)	Txnrd2	F1M6X5	M		4.6 ± 1.3					5.1 ± 1.2	0.77
Uncharacterized protein (Fragment)	Ezr	F1M390	C		28.3 ± 3.2	34.0 ± 6.7	0.852			28.7 ± 9.7	0.85
Uncharacterized protein (Fragment)	Selenbp1	F1LRJ9	C		19.7 ± 7.7	28.0 ± 14.0	0.717			33.0 ± 8.0	0.323
Uncharacterized protein (Fragment)	Mthfd1	F1LW12	C		17.3 ± 1.5	6.3 ± 4.4	0.063			16.3 ± 4.1	0.875
Uncharacterized protein (Fragment)	Grhpr	F1M668	C		14.7 ± 7.5	9.3 ± 3.8	0.542			8.3 ± 6.4	0.553
Uncharacterized protein (Fragment)	Msn	F1LP60	C		9.7 ± 4.8	7.3 ± 4.3	0.761			14.0 ± 7.8	0.596
Uncharacterized protein (Fragment)	Xdh	F1LQS6	C		4.7 ± 0.9	12.7 ± 4.1	0.235			10.7 ± 4.7	0.185
Uncharacterized protein (Fragment)	Ank3	F1LM13	C		6.0 ± 3.5	5.7 ± 5.7	0.837			7.7 ± 7.7	0.791
Uncharacterized protein (Fragment)	Acaa2	F1LWF9	C		6.3 ± 4.9	11.3 ± 7.0	0.614			1.0 ± 0.6	0.492
Uncharacterized protein (Fragment)	Rab1	F1M225	C		3.7 ± 2.7	7.7 ± 5.2	0.69			6.3 ± 3.8	0.508
Uncharacterized protein (Fragment)	Gsr	F1LQY0	C		3.0 ± 1.7	7.7 ± 2.9	0.238			2.0 ± 1.2	0.817
Uncharacterized protein (Fragment)	N/A	F1LY12	C		5.0 ± 2.5	2.0 ± 2.0	0.151			4.3 ± 0.9	0.9
Uncharacterized protein (Fragment)	Lztfl1	F1M818	C		3.7 ± 2.3	4.7 ± 0.9	0.965			2.7 ± 1.3	0.746
Uncharacterized protein (Fragment)	Ak4	F8WG98	C		2.7 ± 0.9	4.7 ± 3.3	0.587			1.0 ± 0.6	0.529
Uncharacterized protein (Fragment)	Pepd	F1LR40	C		3.3 ± 1.5	2.7 ± 1.3	0.596			2.0 ± 1.0	0.538
Uncharacterized protein (Fragment)	Gcn1l1	F1LRI5	C		1.3 ± 0.9	0.7 ± 0.3	0.333			0.7 ± 0.3	0.418
Uncharacterized protein (Fragment)	Rrbp1	F1M5X1	C		1.7 ± 1.7	1.0 ± 1.0	0.565			0.0 ± 0.0	0.307
Uncharacterized protein (Fragment)	Lrba	F1M3T7	C		1.3 ± 1.3	0.3 ± 0.3	0.415			0.7 ± 0.7	0.669
Uncharacterized protein (Fragment)	Psmd14	F1LMW6	C		0.7 ± 0.7	1.3 ± 0.9	0.748			0.3 ± 0.3	0.686
Uncharacterized protein (Fragment)	N/A	F8WFW6	C		0.0 ± 0.0	1.0 ± 1.0	0.639			1.3 ± 1.3	0.305
Uncharacterized protein (Fragment)	Mvp	F1LM41	C		1.3 ± 1.3	0.3 ± 0.3	0.354			0.0 ± 0.0	0.273
Uncharacterized protein (Fragment)	RGD1564597	F1M6F4	C		0.3 ± 0.3	0.7 ± 0.7	0.808			0.0 ± 0.0	0.493
Uncharacterized protein : Vacuolar ATPase H, CRA_a	Atp6v1h	D3ZW96	AM	0	18.33 ± 3.8	13.00 ± 2.	0.416	18.33 ± 0.	1	19.00 ± 5.	0.853
Uncharacterized protein: Atp6v0a4	Atp6v0a4	D3ZY90	AM	6	3.00 ± 1.2	1.33 ± 0.3	0.3	1.00 ± 0.0	0.225	7.33 ± 1.9	0.039
Uncharacterized protein: cytochrome c oxidase 6B1	Atp6v0a4	D3ZD09	AM	0	1.00 ± 0.0	5.67 ± 2.4	0.192	4.33 ± 1.5	0.149	11.00 ± 1.	0.013
Uncharacterized protein: LOC100359503	LOC100359503	D3ZWJ5	AM	0	1.33 ± 0.3	1.00 ± 0.0	0.423	1.33 ± 0.3	1	1.67 ± 0.3	0.423
Uncharacterized protein: Myo6	Myo6	D3ZYX5	AM	0	1.00 ± 0.0	5.00 ± 2.3	0.225	3.33 ± 1.5	0.25	1.00 ± 0.0	1
Uncharacterized protein: 2-oxoglutarate dehydrogenase	Ogdh	D3ZFA6	AM	0	1.00 ± 0.0	9.00 ± 1.7	0.044	2.00 ± 0.0	1	1.00 ± 0.0	1
Uncharacterized protein: Aldehyde_dehydrogenase 8a1	Aldh8a1	D3ZXY4	AM	0	15.67 ± 2.6	9.00 ± 3.1	0.357	5.67 ± 3.2	0.038	4.67 ± 0.3	0.041
Uncharacterized protein: AP-2 complex subunit alpha-1	Ap2a1	D3ZMB9	AM	0	2.00 ± 0.0	1.33 ± 0.3	0.184	1.67 ± 0.7	0.667	2.67 ± 1.2	0.635
Uncharacterized protein: Atp5j2	Atp5j2	D3ZAF6	AM	1	1.00 ± 0.0	8.00 ± 2.6	0.118	8.00 ± 3.1	0.149	3.00 ± 1.5	0.321
Uncharacterized protein: GM2 ganglioside activator	Gm2a	D3ZR01	AM	0	11.00 ± 2.1	9.33 ± 0.9	0.549	12.00 ± 1.	0.58	5.33 ± 2.2	0.003
Uncharacterized protein: Maltase-glucoamylase	NA	D3ZTX4	AM	1	11.33 ± 0.3	14.33 ± 1.	0.189	18.67 ± 0.	0.014	11.33 ± 1.	1
Uncharacterized protein: Maltase-glucoamylase (b)	NA	D4A3J6	AM	1	12.00 ± 1.0	1.67 ± 0.7	0.007	6.33 ± 3.2	0.301	16.67 ± 1.	0.229
Uncharacterized protein: Monoglyceride lipase	Mgll	D4A892	AM	0	2.00 ± 0.6	3.00 ± 1.0	0.478	1.67 ± 0.7	0.808	2.33 ± 0.9	0.667
Uncharacterized protein: Prohibitin	NA	D4AD84	AM	0	1.00 ± 0.0	2.67 ± 0.7	0.13	1.67 ± 0.7	0.423	2.33 ± 0.9	0.27
Uncharacterized protein: Rab GDP diss. inhibitor beta	NA	D3ZNI1	AM	0	16.33 ± 1.7	1.00 ± 0.0	0.012	1.00 ± 0.0	0.012	1.00 ± 0.0	0.012
Uncharacterized protein: Rab8a	Rab8a	D3Z848	AM	0	1.67 ± 0.3	1.67 ± 0.3	1	1.33 ± 0.3	0.423	1.33 ± 0.3	0.667
Uncharacterized protein: SLC22A6	lc22a6	D4A5Y1	AM	8	11.33 ± 0.7	8.33 ± 0.9	0.096	11.33 ± 0.	1	11.00 ± 0.	0.423
Uncharacterized protein: SLC5A8	Slc5a8	D3Z9E5	AM	13	5.67 ± 1.2	8.67 ± 1.5	0.356	20.00 ± 0.	0.004	16.33 ± 1.	0.065
Uncharacterized protein: synaptophysin-like protein 1	Sypl1	D3ZZU5	AM	3	3.00 ± 1.2	1.00 ± 0.0	0.225	1.00 ± 0.0	0.225	1.00 ± 0.0	0.225
Uncharacterized protein: Villin-like protein	Vill	D3Z8F1	AM	0	8.67 ± 1.9	12.00 ± 1.	0.346	16.00 ± 2.	0.197	5.67 ± 2.6	0.562
UPF0598 protein C8orf82 homolog	NA	Q642A4	M		1.9 ± 1					0 ± 0	0.13
Up-regulated during skeletal muscle growth protein 5	Usmg5	Q9JJW3	M	1	3.7 ± 3.1					8 ± 2.4	0.32
Very long-chain acyl-CoA synthetase	Slc27a2	P97524	M	2	50.3 ± 4.1					54.2 ± 3.9	0.52
Vesicle-associated membrane protein-associated protein A	Vapa	Q9Z270	M	1	4 ± 2.4					0.9 ± 0.6	0.27
Vesicle-associated membrane protein-associated protein B	Vapb	Q9Z269	M	1	1.5 ± 1.5					1.2 ± 0.4	0.86
Vil1 protein	Vil1	B5DFA0	AM	0	27.67 ± 15.7	20.33 ± 9.	0.783	19.67 ± 1.	0.648	20.67 ± 8.	0.747
Vimentin	Vim	P31000	M		6.5 ± 6.5					1.2 ± 0.9	0.46
Vinculin	Vcl	P85972	M		1.6 ± 0.4					1.2 ± 0.4	0.54
Vinculin	Vcl	P85972	C		2.3 ± 2.3	2.7 ± 1.5	0.841			1.0 ± 1.0	0.716
Vitamin D-binding protein	Gc	P04276	M		15 ± 4.5					40.2 ± 1.9	0.006
Voltage-dependent anion-selective channel 1	Vdac1	Q9Z2L0	AM	0	2.00 ± 0.6	20.00 ± 1.	0.007	17.00 ± 3.	0.051	17.00 ± 2.	0.023
Voltage-dependent anion-selective channel protein 1	Vdac1	Q9Z2L0	M		236.6 ± 24.8					293.4 ± 24.4	0.18
Voltage-dependent anion-selective channel protein 2	Vdac2	P81155	M		28.9 ± 11.4					30.6 ± 1	0.88
V-type proton ATPase 16 kDa proteolipid subunit	Atp6v0c	P63081	AM	4	2.00 ± 1.0	1.00 ± 0.0	0.423	1.00 ± 0.0	0.423	12.33 ± 8.	0.378
V-type proton ATPase subunit B, brain isoform	Atp6v1b2	P62815	M		145.7 ± 22.4					129.2 ± 19.4	0.61
V-type proton ATPase subunit B, brain isoform	Atp6v1b2	P62815	AM	0	52.00 ± 1.5	39.33 ± 2.	0.019	33.67 ± 4.	0.063	47.33 ± 7.	0.572
V-type proton ATPase subunit B, brain isoform	Atp6v1b2	P62815	C		27.7 ± 12.5	33.0 ± 5.7	0.799			18.0 ± 2.6	0.601
V-type proton ATPase subunit C 1	Atp6v1c1	Q5FVI6	M		19.1 ± 2.6					16.3 ± 4.8	0.62
V-type proton ATPase subunit C 1	Atp6v1c1	Q5FVI6	AM	0	12.00 ± 2.6	23.33 ± 2.	0.178	26.00 ± 1.	0.049	5.33 ± 1.3	0.218
V-type proton ATPase subunit E 1	Atp6v1e1	Q6PCU2	AM	0	16.00 ± 1.0	31.67 ± 1.	0.003	32.00 ± 3.	0.057	22.33 ± 2.	0.034
V-type proton ATPase subunit F	Atp6v1f	P50408	M		10.8 ± 2					8.5 ± 3.1	0.56
V-type proton ATPase subunit F	Atp6v1f	P50408	AM	0	8.00 ± 1.2	2.00 ± 1.0	0.009	2.00 ± 0.6	0.059	6.33 ± 4.8	0.713
WD repeat-containing protein 1	Wdr1	Q5RKI0	C		2.0 ± 1.5	10.7 ± 1.2	0.024			2.0 ± 1.5	0.894
Xaa-Pro aminopeptidase 1	Xpnpep1	O54975	M		6.9 ± 2.4					7.9 ± 3.8	0.83
Xaa-Pro aminopeptidase 1	Xpnpep1	O54975	AM	0	2.00 ± 0.0	1.00 ± 0.0	1	1.00 ± 0.0	1	1.00 ± 0.0	1
Xaa-Pro dipeptidase	Pepd	Q5I0D7	AM	0	2.67 ± 1.2	1.00 ± 0.0	0.3	1.00 ± 0.0	0.3	1.00 ± 0.0	0.3
Xanthine dehydrogenase/oxidase	Xdh	P22985	M		3.4 ± 2.9					3.7 ± 1.1	0.95