This protein list has been extracted from the full IMCD proteome found on the IMCD Proteome Database. The list includes both integral-membrane proteins and GPI-linked proteins. The list was reported in Yu et al., 2008, PMID: 18596208. All data are from IMCD cells freshly purified from rat inner medullas. See ESBL Databases for more extensive compendia of IMCD proteins.
This website was created by Brad Yu and Mark Knepper. Contact us with questions or comments: knep@helix.nih.gov. Click to download data.
| Protein Annotation | Gene Symbol | Amino Acid Number | Calculated M.W. (Da) |
| ATP-binding cassette sub-family A member 2 | Abca2 | 2434 | 270798 |
| bile salt export pump | Abcb11 | 1321 | 146128 |
| multidrug resistance protein 1 | Abcb1b | 1275 | 141092 |
| multidrug resistance-associated protein 4 | Abcc4 | 1325 | 148734 |
| ATP-binding cassette sub-family C member 9 | Abcc9 | 1545 | 174175 |
| ATP-binding cassette sub-family F member 1 | Abcf1 | 837 | 94815 |
| angiotensin-converting enzyme precursor | Ace | 1313 | 147263 |
| long-chain-fatty-acid--CoA ligase 4 | Acsl4 | 670 | 74196 |
| long-chain-fatty-acid--CoA ligase 5 | Acsl5 | 683 | 76274 |
| serine/threonine-protein kinase receptor R3 precursor | Acvrl1 | 504 | 54483 |
| disintegrin and metalloproteinase domain-containing protein 10 | Adam10 | 749 | 83956 |
| disintegrin and metalloproteinase domain-containing protein 17 precursor | Adam17 | 827 | 68285 |
| disintegrin and metalloproteinase domain-containing protein 7 precursor | Adam7 | 789 | 86670 |
| adenylate cyclase type 6 isoform 2 | Adcy6 | 1166 | 130376 |
| adenylate cyclase type 8 | Adcy8 | 1248 | 139692 |
| adhesion G protein-coupled receptor F5 precursor | Adgrf5 | 1349 | 146743 |
| adhesion G-protein coupled receptor G2 isoform 1 precursor | Adgrg2 | 1013 | 106564 |
| adhesion G protein-coupled receptor L2 isoform 1 precursor | Adgrl2 | 1487 | 163973 |
| agrin precursor | Agrn | 1940 | 206431 |
| CD166 antigen precursor | Alcam | 583 | 62293 |
| alpha-1,3/1,6-mannosyltransferase ALG2 | Alg2 | 415 | 47274 |
| alkaline phosphatase, tissue-nonspecific isozyme precursor | Alpl | 524 | 53580 |
| aminopeptidase N precursor | Anpep | 965 | 106231 |
| aquaporin-2 | Aqp2 | 271 | 28800 |
| aquaporin-4 isoform 1 | Aqp4 | 323 | 34349 |
| potassium-transporting ATPase alpha chain 2 a | Atp12a | 1036 | 114787 |
| sodium/potassium-transporting ATPase subunit alpha-1 precursor | Atp1a1 | 1023 | 112924 |
| sodium/potassium-transporting ATPase subunit alpha-2 precursor | Atp1a2 | 1020 | 112087 |
| sodium/potassium-transporting ATPase subunit alpha-3 | Atp1a3 | 1013 | 111605 |
| sodium/potassium-transporting ATPase subunit alpha-4 | Atp1a4 | 1028 | 113874 |
| sodium/potassium-transporting ATPase subunit beta-1 | Atp1b1 | 304 | 35071 |
| sodium/potassium-transporting ATPase subunit beta-3 | Atp1b3 | 279 | 31699 |
| sarcoplasmic/endoplasmic reticulum calcium ATPase 1 | Atp2a1 | 994 | 109279 |
| ATPase, Ca++ transporting, slow twitch 2 isoform a | Atp2a2 | 1043 | 114637 |
| sarcoplasmic/endoplasmic reticulum calcium ATPase 3 | Atp2a3 | 999 | 109229 |
| plasma membrane calcium-transporting ATPase 1 | Atp2b1 | 1176 | 129380 |
| plasma membrane calcium-transporting ATPase 2 | Atp2b2 | 1198 | 132485 |
| plasma membrane calcium-transporting ATPase 4 | Atp2b4 | 1169 | 128660 |
| Potassium-transporting ATPase alpha chain 1 (Proton pump) (Gastric H+/K+ ATPase alpha subunit) | Atp4a | 1034 | 113977 |
| V-type proton ATPase 116 kDa subunit a isoform 1 | Atp6v0a1 | 838 | 96125 |
| copper-transporting ATPase 1 | Atp7a | 1492 | 161963 |
| basal cell adhesion molecule precursor | Bcam | 624 | 64899 |
| basigin isoform 2 precursor | Bsg | 272 | 27492 |
| barttin | Bsnd | 308 | 33764 |
| voltage-dependent L-type calcium channel subunit alpha-1C | Cacna1c | 2170 | 243373 |
| voltage-dependent T-type calcium channel subunit alpha-1G isoform 2 | Cacna1g | 2255 | 250176 |
| voltage-dependent calcium channel subunit alpha-2/delta-1 isoform 1 precursor | Cacna2d1 | 1091 | 120963 |
| calreticulin precursor | Calr | 416 | 46349 |
| calnexin precursor | Canx | 591 | 65129 |
| carbonic anhydrase 4 precursor | Car4 | 309 | 30353 |
| caveolin-1 isoform beta | Cav1 | 147 | 16972 |
| monocyte differentiation antigen CD14 precursor | Cd14 | 372 | 35335 |
| CD151 antigen | Cd151 | 253 | 28224 |
| antigen-presenting glycoprotein CD1d precursor | Cd1d1 | 336 | 36334 |
| CD40 ligand | Cd40lg | 260 | 29129 |
| CD48 antigen precursor | Cd48 | 240 | 22542 |
| CD59 glycoprotein precursor | Cd59 | 126 | 11418 |
| CD9 antigen | Cd9 | 226 | 25127 |
| cadherin-1 precursor | Cdh1 | 886 | 80448 |
| cadherin-16 precursor | Cdh16 | 830 | 87707 |
| cadherin-23 precursor | Cdh23 | 3317 | 362802 |
| cadherin EGF LAG seven-pass G-type receptor 2 | Celsr2 | 2919 | 316993 |
| cadherin EGF LAG seven-pass G-type receptor 3 precursor | Celsr3 | 3313 | 355822 |
| acetylcholine receptor subunit delta precursor | Chrnd | 517 | 56890 |
| chloride channel protein ClC-Ka | Clcnka | 687 | 75438 |
| chloride channel protein ClC-Ka | Clcnka | 687 | 75554 |
| claudin-4 | Cldn4 | 210 | 22208 |
| chloride intracellular channel protein 1 | Clic1 | 241 | 26850 |
| chloride intracellular channel protein 4 | Clic4 | 253 | 28502 |
| protein canopy homolog 2 precursor | Cnpy2 | 182 | 18629 |
| cannabinoid receptor 2 isoform 2 | Cnr2 | 410 | 45032 |
| contactin-1 precursor | Cntn1 | 1021 | 109189 |
| contactin-associated protein 1 precursor | Cntnap1 | 1381 | 153822 |
| catechol O-methyltransferase | Comt | 264 | 29466 |
| cytochrome c oxidase subunit I (mitochondrion) | COX1 | 514 | 56806 |
| cytochrome c oxidase subunit II (mitochondrion) | COX2 | 227 | 25797 |
| cytochrome c oxidase subunit 4 isoform 1, mitochondrial precursor | Cox4i1 | 169 | |
| carboxypeptidase D precursor | Cpd | 1378 | 148427 |
| carnitine O-palmitoyltransferase 1, liver isoform | Cpt1a | 773 | 87995 |
| cytochrome b5 | Cyb5a | 134 | 15224 |
| cytochrome b5 type B precursor | Cyb5b | 146 | 16134 |
| cytochrome b-245, beta polypeptide | Cybb | 570 | 65219 |
| cytochrome P450 1A1 | Cyp1a1 | 524 | 59280 |
| cytochrome P450 2C70 | Cyp2c22 | 489 | 56083 |
| cytochrome P450 4B1 | Cyp4b1 | 511 | 58806 |
| dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 | Dad1 | 113 | 12366 |
| dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit precursor | Ddost | 441 | 45970 |
| endomucin precursor | Emcn | 250 | 24251 |
| ectonucleotide pyrophosphatase/phosphodiesterase family member 1 | Enpp1 | 906 | 102812 |
| epithelial cell adhesion molecule precursor | Epcam | 315 | 33015 |
| endoplasmic reticulum resident protein 29 precursor | Erp29 | 260 | 25609 |
| extended synaptotagmin-1 | Esyt1 | 1088 | 121048 |
| protocadherin Fat 2 precursor | Fat2 | 4351 | 478752 |
| flotillin-1 | Flot1 | 428 | 47368 |
| sodium/potassium-transporting ATPase subunit gamma isoform b | Fxyd2 | 64 | 7107 |
| FXYD domain-containing ion transport regulator 4 precursor | Fxyd4 | 87 | 7041 |
| frizzled-1 precursor | Fzd1 | 642 | 63642 |
| mannosyl-oligosaccharide glucosidase | Gcs1 | 834 | 91741 |
| vitamin K-dependent gamma-carboxylase | Ggcx | 758 | 87348 |
| Golgi apparatus protein 1 precursor | Glg1 | 1171 | 130136 |
| glutamate receptor 1 precursor | Gria1 | 907 | 99657 |
| glutamate receptor ionotropic, kainate 4 precursor | Grik4 | 956 | 105121 |
| glutamate receptor ionotropic, NMDA 2A precursor | Grin2a | 1464 | 162960 |
| glutamate receptor ionotropic, NMDA 2D precursor | Grin2d | 1323 | 140314 |
| metabotropic glutamate receptor 4 precursor | Grm4 | 912 | 98262 |
| olfactory guanylyl cyclase GC-D precursor | Gucy2d | 1110 | 114710 |
| potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 | Hcn1 | 910 | 102291 |
| Huntingtin (Huntington disease protein homolog) (HD protein) | Hdh | 3120 | 344617 |
| endoplasmin precursor | Hsp90b1 | 802 | 90097 |
| 5-hydroxytryptamine receptor 2A | Htr2a | 471 | 52719 |
| intercellular adhesion molecule 1 precursor | Icam1 | 545 | 57418 |
| insulin-like growth factor 1 receptor precursor | Igf1r | 1370 | 80638 |
| cation-independent mannose-6-phosphate receptor precursor | Igf2r | 2481 | 270169 |
| integrin alpha-1 precursor | Itga1 | 1180 | 127753 |
| integrin alpha-2 precursor | Itga2 | 1178 | 126350 |
| integrin alpha-3 isoform 1 preproprotein | Itga3 | 1053 | 113455 |
| integrin alpha-7 precursor | Itga7 | 1135 | 120651 |
| integrin alpha-V precursor | Itgav | 1044 | 112290 |
| integrin beta-1 precursor | Itgb1 | 798 | 86109 |
| inositol 1,4,5-trisphosphate receptor type 1 isoform 1 | Itpr1 | 2748 | 312878 |
| inositol 1,4,5-trisphosphate receptor type 2 | Itpr2 | 2701 | 306929 |
| inositol 1,4,5-trisphosphate receptor type 3 | Itpr3 | 2670 | 304157 |
| potassium voltage-gated channel subfamily D member 3 isoform 3 precursor | Kcnd3 | 611 | 67738 |
| potassium voltage-gated channel subfamily H member 5 | Kcnh5 | 988 | 111699 |
| potassium voltage-gated channel subfamily H member 6 | Kcnh6 | 950 | 105575 |
| ATP-sensitive inward rectifier potassium channel 1 isoform 1 | Kcnj1 | 391 | 44818 |
| potassium channel subfamily K member 13 | Kcnk13 | 405 | 44950 |
| small conductance calcium-activated potassium channel protein 1 | Kcnn1 | 536 | 59084 |
| potassium voltage-gated channel subfamily KQT member 3 | Kcnq3 | 912 | 100817 |
| neural cell adhesion molecule L1 precursor | L1cam | 1255 | 138229 |
| lysosome-associated membrane glycoprotein 1 precursor | Lamp1 | 407 | 41846 |
| lysosome-associated membrane glycoprotein 2 precursor | Lamp2 | 411 | 42429 |
| LETM1 and EF-hand domain-containing protein 1, mitochondrial precursor | Letm1 | 739 | 70764 |
| lutropin-choriogonadotropic hormone receptor precursor | Lhcgr | 700 | 75154 |
| vesicular integral-membrane protein VIP36 precursor | Lman2 | 358 | 35469 |
| leucyl-cystinyl aminopeptidase isoform 2 | Lnpep | 916 | 104439 |
| lipoprotein lipase precursor | Lpl | 474 | 50298 |
| low-density lipoprotein receptor-related protein 4 precursor | Lrp4 | 1905 | 209755 |
| cation-dependent mannose-6-phosphate receptor precursor | M6pr | 278 | 28754 |
| Amine oxidase [flavin-containing] A (Monoamine oxidase type A) (MAO-A) | Maoa | 892 | 97944 |
| malectin isoform1 precursor | MLEC | 292 | 29323 |
| myoferlin | Myof | 2050 | 233515 |
| NACHT-, LRR- and PYD-containing protein 6 (PYRIN-containing APAF1-like protein 5-like) (Angiotensin II/vasopressin receptor) | Nalp6 | 900 | 100139 |
| Neurogenic locus notch homolog protein 1 precursor (Notch 1) | Notch1 | 2548 | 272684 |
| neurogenic locus notch homolog protein 2 precursor | Notch2 | 2471 | 262498 |
| neurogenic locus notch homolog protein 3 precursor | Notch3 | 2319 | 240040 |
| atrial natriuretic peptide receptor 1 precursor | Npr1 | 1057 | 115840 |
| neuropilin-1 precursor | Nrp1 | 922 | 101032 |
| oxidation resistance 1 | Oxr1 | 873 | 96891 |
| protein disulfide-isomerase precursor | P4hb | 509 | 54983 |
| prenylcysteine oxidase precursor | Pcyox1 | 504 | 53541 |
| protein disulfide-isomerase A3 precursor | Pdia3 | 505 | 54206 |
| protein disulfide-isomerase A4 precursor | Pdia4 | 643 | 70216 |
| protein disulfide-isomerase A6 precursor | Pdia6 | 445 | 46193 |
| protein disulfide-isomerase A6 precursor | Pdia6 | 445 | 46193 |
| membrane-associated progesterone receptor component 1 | Pgrmc1 | 223 | 24534 |
| membrane-associated progesterone receptor component 2 | Pgrmc2 | 217 | 23272 |
| GPI transamidase component PIG-S | Pigs | 555 | 61593 |
| proteolipid protein 2 | Plp2 | 151 | 16425 |
| plasmalemma vesicle-associated protein | Plvap | 438 | 49902 |
| podocalyxin precursor | Podxl | 485 | 49111 |
| lipid phosphate phosphohydrolase 3 | Ppap2b | 312 | 35102 |
| peripherin-2 | Prph2 | 346 | 39137 |
| prostaglandin F2-alpha receptor | Ptgfr | 366 | 40524 |
| prostaglandin F2 receptor negative regulator precursor | Ptgfrn | 879 | 96544 |
| redox-regulatory protein FAM213A | RGD1309676 | 229 | 25632 |
| dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 precursor | Rpn1 | 606 | 66073 |
| dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 precursor | Rpn2 | 631 | 66932 |
| RT1 class Ia, locus A2 precursor | RT1-A2 | 366 | 39025 |
| class I histocompatibility antigen, Non-RT1.A alpha-1 chain precursor | RT1-EC2 | 319 | 34078 |
| reticulon-4 | Rtn4 | 1163 | 126257 |
| sphingosine 1-phosphate receptor 5 | S1pr5 | 400 | 42238 |
| secretory carrier-associated membrane protein 1 | Scamp1 | 338 | 37898 |
| secretory carrier-associated membrane protein 2 | Scamp2 | 329 | 36419 |
| secretory carrier-associated membrane protein 3 isoform 2 | Scamp3 | 349 | 38327 |
| lysosome membrane protein 2 precursor | Scarb2 | 478 | 51349 |
| sodium channel protein type 11 subunit alpha | Scn11a | 1765 | 201715 |
| sodium channel protein type 4 subunit alpha | Scn4a | 1840 | 208737 |
| sodium channel protein type 5 subunit alpha isoform 1 | Scn5a | 2019 | 227237 |
| sodium channel protein type 9 subunit alpha | Scn9a | 1984 | 225909 |
| signal peptidase complex catalytic subunit SEC11A | Sec11a | 179 | 20495 |
| semaphorin-6C precursor | Sema6c | 960 | 100088 |
| sideroflexin-3 | Sfxn3 | 321 | 35302 |
| sphingosine-1-phosphate lyase 1 | Sgpl1 | 568 | 63627 |
| solute carrier family 12 member 5 | Slc12a5 | 1116 | 123433 |
| urea transporter 2 isoform 1 | Slc14a2 | 929 | 101767 |
| monocarboxylate transporter 2 | Slc16a7 | 489 | 52912 |
| mitochondrial 2-oxoglutarate/malate carrier protein | Slc25a11 | 314 | |
| mitochondrial 2-oxoglutarate/malate carrier protein | Slc25a11 | 314 | |
| phosphate carrier protein, mitochondrial isoform 2 precursor | Slc25a3 | 356 | 34828 |
| ADP/ATP translocase 1 | Slc25a4 | 298 | 32858 |
| ADP/ATP translocase 2 | Slc25a5 | 298 | 32770 |
| solute carrier family 2, facilitated glucose transporter member 1 | Slc2a1 | 492 | 53832 |
| band 3 anion transport protein | Slc4a1 | 928 | 103113 |
| sodium/glucose cotransporter 1 | Slc5a1 | 665 | 72936 |
| sodium-dependent dopamine transporter | Slc6a3 | 619 | 68615 |
| sodium- and chloride-dependent taurine transporter | Slc6a6 | 621 | 69738 |
| sodium/hydrogen exchanger 2 isoform 2 | Slc9a2 | 697 | 78932 |
| sortilin-related receptor, LDLR class A repeats-containing | Sorl1 | 1811 | 201899 |
| sortilin 1 isoform 2 | Sort1 | 858 | 94598 |
| signal peptidase complex subunit 2 | Spcs2 | 226 | 24847 |
| squalene monooxygenase | Sqle | 573 | 63893 |
| translocon-associated protein subunit alpha precursor | Ssr1 | 287 | 29831 |
| translocon-associated protein subunit delta precursor | Ssr4 | 173 | 16796 |
| suppression of tumorigenicity 14 | St14 | 827 | 91888 |
| syntaxin-12 | Stx12 | 274 | 31056 |
| syntaxin 16 isoform b | Stx16 | 309 | 35310 |
| syntaxin-5 | Stx5 | 355 | 39620 |
| syntaxin-7 | Stx7 | 261 | 29720 |
| syntaxin-8 | Stx8 | 236 | 26780 |
| synaptogyrin-2 | Syngr2 | 234 | 25578 |
| synaptophysin-like protein 1 | Sypl1 | 258 | 28497 |
| synaptotagmin-13 | Syt13 | 426 | 46750 |
| synaptotagmin-like protein 5 | Sytl5 | 753 | 83514 |
| very-long-chain enoyl-CoA reductase | Tecr | 308 | 35992 |
| transferrin receptor | Tfrc | 760 | 85615 |
| TGF-beta receptor type-1 precursor | Tgfbr1 | 497 | 52722 |
| trans-Golgi network integral membrane protein TGN38 precursor | Tgoln2 | 357 | 36508 |
| thy-1 membrane glycoprotein preproprotein | Thy1 | 161 | 12759 |
| transmembrane 9 superfamily member 2 precursor | Tm9sf2 | 663 | 72678 |
| transmembrane emp24 domain-containing protein 10 precursor | Tmed10 | 219 | 21748 |
| transmembrane emp24 domain-containing protein 2 precursor | Tmed2 | 201 | 20781 |
| transmembrane emp24 domain-containing protein 4 precursor | Tmed4 | 227 | 23193 |
| transmembrane protein 16F | Tmem16f | 918 | 106802 |
| Transmembrane protease, serine 9 (Polyserase-1) (Polyserine protease 1) (Polyserase-I) | Tmprss9 | 1103 | 118514 |
| transient receptor potential cation channel subfamily M member 8 | Trpm8 | 1104 | 127498 |
| hamartin | Tsc1 | 1163 | 128892 |
| tuberin | Tsc2 | 1809 | 201148 |
| tyrosine-protein kinase receptor TYRO3 precursor | Tyro3 | 880 | 92807 |
| UDP-glucose:glycoprotein glucosyltransferase 1 precursor | Uggt1 | 1527 | 172205 |
| uromodulin precursor | Umod | 644 | 65218 |
| vesicle-associated membrane protein 2 | Vamp2 | 116 | 12560 |
| vesicle-associated membrane protein 3 | Vamp3 | 103 | 11349 |
| vesicle-associated membrane protein-associated protein A | Vapa | 249 | 27710 |
| vesicle-associated membrane protein-associated protein B | Vapb | 243 | 26785 |
| voltage-dependent anion-selective channel protein 1 | Vdac1 | 283 | 30624 |
| voltage-dependent anion-selective channel protein 2 | Vdac2 | 295 | 31615 |
| voltage-dependent anion-selective channel protein 3 | Vdac3 | 283 | 30667 |
| vesicle transport through interaction with t-SNAREs homolog 1A | Vti1a | 217 | 25030 |
| palmitoyltransferase ZDHHC7 | Zdhhc7 | 308 | 35100 |
